RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ANKRD61A6NGH8 418 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 MAGEB4O15481 346 aaPredicted RBP12.31□□□□□ -0.44
NEK4-201ENST00000233027 DDAH2O95865 285 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 CSNK1EP49674 416 aaKnown RBP12.31□□□□□ -0.44
NEK4-201ENST00000233027 TLE4Q04727 773 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 CD276Q5ZPR3 534 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 GDPD3Q7L5L3 318 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 OR52I2Q8NH67 350 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 HDAC8Q9BY41 377 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 TAS2R4Q9NYW5 299 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 PIGLQ9Y2B2 252 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 A0A0B4J203 849 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 PMS2P2O95744 297 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 CNR1P21554 472 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 CMIPQ8IY22 773 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 SLC6A18Q96N87 628 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 TEAD3Q99594 435 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 CTRCQ99895 268 aa12.31□□□□□ -0.44
NEK4-201ENST00000233027 NDRG4Q9ULP0 352 aaKnown RBP12.31□□□□□ -0.44
NEK4-201ENST00000233027 ZNF195O14628 629 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 PTAFRP25105 342 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 OR10A3P58181 314 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 NXPE3Q969Y0 559 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 DAZAP1Q96EP5 407 aaKnown RBP12.3□□□□□ -0.44
NEK4-201ENST00000233027 EXOSC3Q9NQT5 275 aaKnown RBP12.3□□□□□ -0.44
NEK4-201ENST00000233027 PISDQ9UG56 409 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.3□□□□□ -0.44
NEK4-201ENST00000233027 IGHV3-20A0A0C4DH32 117 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 SIGLEC6O43699 453 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 SLC35E2P0CK97 266 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 DEFA6Q01524 100 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 AKR1C1Q04828 323 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 OTUD1Q5VV17 481 aaPredicted RBP12.3□□□□□ -0.44
NEK4-201ENST00000233027 VASH1Q7L8A9 365 aaPredicted RBP12.3□□□□□ -0.44
NEK4-201ENST00000233027 OR52H1Q8NGJ2 320 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 SCARB1Q8WTV0 552 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 SEMA6CQ9H3T2 930 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 HRASLSQ9HDD0 168 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 ANKRD10Q9NXR5 420 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 AGAP14A8MT82 685 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 TMX2-CTNND1H3BSU7 103 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 EPHA5P54756 1037 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 UBE2MP61081 183 aaKnown RBP12.3□□□□□ -0.44
NEK4-201ENST00000233027 KIAA0907Q7Z7F0 614 aaPredicted RBP12.3□□□□□ -0.44
NEK4-201ENST00000233027 ANGPTL5Q86XS5 388 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 OR4Q3Q8NH05 313 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 ATOH1Q92858 354 aaPredicted RBP12.3□□□□□ -0.44
NEK4-201ENST00000233027 RNF170Q96K19 258 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 DUSP23Q9BVJ7 150 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 IKZF5Q9H5V7 419 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 RAB22AQ9UL26 194 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 ANKRD34BA5PLL1 514 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 TXNDC12O95881 172 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 TGM6O95932 706 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 CD14P08571 375 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 RHOUQ7L0Q8 258 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 PDXPQ96GD0 296 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 OR11A1Q9GZK7 315 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 OR52A5Q9H2C5 316 aa12.3□□□□□ -0.44
NEK4-201ENST00000233027 RNF212BA8MTL3 300 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 FOSL1P15407 271 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 SLC35A1P78382 337 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 OXA1LQ15070 435 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 SLC35A4Q96G79 324 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 SLC39A9Q9NUM3 307 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 URGCP-MRPS24S4R325 110 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 OR6C76A6NM76 312 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 C17orf112F2Z3M2 114 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 TIMM8AO60220 97 aaPredicted RBP12.29□□□□□ -0.44
NEK4-201ENST00000233027 TAGLN2P37802 199 aaKnown RBP12.29□□□□□ -0.44
NEK4-201ENST00000233027 RAD52P43351 418 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 SSR4P51571 173 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 TGFBR3Q03167 851 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 FAM122CQ6P4D5 195 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 TMEM200AQ86VY9 491 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 MARC2Q969Z3 335 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 BOKQ9UMX3 212 aaPredicted RBP12.29□□□□□ -0.44
NEK4-201ENST00000233027 AKR7A3O95154 331 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 EIF4EP06730 217 aaKnown RBP12.29□□□□□ -0.44
NEK4-201ENST00000233027 CALCBP10092 127 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 MGST1P10620 155 aaKnown RBP12.29□□□□□ -0.44
NEK4-201ENST00000233027 DPP4P27487 766 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 C17orf67Q0P5P2 114 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 SLC35D3Q5M8T2 416 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 WBP2Q969T9 261 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 RHNO1Q9BSD3 238 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 GABARAPL1Q9H0R8 117 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 HIF1ANQ9NWT6 349 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 NDUFB11Q9NX14 153 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 SDHAF2Q9NX18 166 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 SOX18P35713 384 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 TSFMP43897 325 aaKnown RBP12.29□□□□□ -0.44
NEK4-201ENST00000233027 C2CD4CQ8TF44 421 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 YIPF5Q969M3 257 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 UPRTQ96BW1 309 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 ZNF578Q96N58 590 aaPredicted RBP12.29□□□□□ -0.44
NEK4-201ENST00000233027 PTDSS2Q9BVG9 487 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 PATZ1Q9HBE1 687 aaKnown RBP12.29□□□□□ -0.44
NEK4-201ENST00000233027 FLVCR2Q9UPI3 526 aa12.29□□□□□ -0.44
NEK4-201ENST00000233027 A0A087WUU8 490 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms