RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 H7C417 338 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 DKK1O94907 266 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 GLSO94925 669 aaPredicted RBP18.66■□□□□ 0.58
SNX3-201ENST00000230085 HRGP04196 525 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 PROS1P07225 676 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 ART1P52961 327 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 CLDN6P56747 220 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 PON3Q15166 354 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 DPY19L2P2Q6ZN68 376 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 NUDT22Q9BRQ3 303 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 HRASLS2Q9NWW9 162 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 MTFP1Q9UDX5 166 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 DAPP1Q9UN19 280 aa18.66■□□□□ 0.58
SNX3-201ENST00000230085 TRBV5-5A0A0J9YX44 114 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 A0A1B0GW55 424 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 NTN3O00634 580 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 DUX4L2P0CJ85 424 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 DUX4L3P0CJ86 424 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 DUX4L4P0CJ87 422 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 DUX4L5P0CJ88 424 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 DUX4L6P0CJ89 424 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 DUX4L7P0CJ90 424 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 CSF2RBP32927 897 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 INSM1Q01101 510 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 CBFBQ13951 182 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 GK2Q14410 553 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 OR5M10Q6IEU7 315 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 FCRLAQ7L513 359 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 COX18Q8N8Q8 333 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 OR51A7Q8NH64 312 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 PCNPQ8WW12 178 aaKnown RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 ZMYND19Q96E35 227 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 SLC25A32Q9H2D1 315 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 BEX1Q9HBH7 125 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 SPHK1Q9NYA1 384 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 FLRT3Q9NZU0 649 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 DUX4Q9UBX2 424 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 KLK11Q9UBX7 282 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 ZNF69Q9UC07 566 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 A0A1B0GWA3 101 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 HSPB2A8KAH6 182 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 DUX1O43812 170 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 NKX2-2O95096 273 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 ZNF888P0CJ79 500 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 ACAA2P42765 397 aaKnown RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 CAPZBP47756 277 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 TAS2R20P59543 309 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 PPP1CAP62136 330 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 MAT1AQ00266 395 aaKnown RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 HSPB2Q16082 182 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 IZUMO1Q8IYV9 350 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 OR52E2Q8NGJ4 325 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 OR6N1Q8NGY5 312 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 SYNPRQ8TBG9 265 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 SMAP2Q8WU79 429 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 RGP1Q92546 391 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 CCNL2Q96S94 520 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 CDCP1Q9H5V8 836 aa18.65■□□□□ 0.58
SNX3-201ENST00000230085 MYOZ1Q9NP98 299 aaPredicted RBP18.65■□□□□ 0.58
SNX3-201ENST00000230085 KNTC1P50748 2209 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 URADA6NGE7 173 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 ATP6V1G2-DDX39BF2Z307 99 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 PEX12O00623 359 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 TSPAN4O14817 238 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 ZNF432O94892 652 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 STATHP02808 62 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 LPLP06858 475 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 SLC35G6P0C7Q6 338 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 HIST1H1CP16403 213 aaKnown RBP18.64■□□□□ 0.57
SNX3-201ENST00000230085 ZNF10P21506 573 aaPredicted RBP18.64■□□□□ 0.57
SNX3-201ENST00000230085 GMFBP60983 142 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 TOMM20Q15388 145 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 GSG1LQ6UXU4 331 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 ZNF574Q6ZN55 896 aaPredicted RBP18.64■□□□□ 0.57
SNX3-201ENST00000230085 CDH26Q8IXH8 852 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 PDZD9Q8IXQ8 264 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 DND1Q8IYX4 353 aaKnown RBP18.64■□□□□ 0.57
SNX3-201ENST00000230085 STPG2Q8N412 459 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 NPEPL1Q8NDH3 523 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 THRSPQ92748 146 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 CTHRC1Q96CG8 243 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 CXorf58Q96LI9 332 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 PDCD1LG2Q9BQ51 273 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 SLITRK2Q9H156 845 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 GNG8Q9UK08 70 aa18.64■□□□□ 0.57
SNX3-201ENST00000230085 SPTBN2O15020 2390 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 FAM221BA6H8Z2 402 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 TTLL8A6PVC2 850 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 MPTX1A8MV57 137 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 XRCC3O43542 346 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 LDB3O75112 727 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 CSF1P09603 554 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 CDK2P24941 298 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 SLC25A1P53007 311 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 GFERP55789 205 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 BTN1A1Q13410 526 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 SQSTM1Q13501 440 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 OOSP2Q86WS3 158 aa18.63■□□□□ 0.57
SNX3-201ENST00000230085 KCT2Q8NC54 265 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms