RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 Q499Y3 187 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 C6orf183Q5T699 404 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 PLPP7Q8NBV4 271 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 DEFB108BQ8NET1 73 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 ZPBPQ9BS86 351 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 RCE1Q9Y256 329 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 IGHV1OR15-9A0A0B4J2B8 117 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 I6L893 689 aaPredicted RBP16.9■□□□□ 0.3
CLIP2-201ENST00000223398 RAB27BO00194 218 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 FZD7O75084 574 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 LGI1O95970 557 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 RAD52P43351 418 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 ZNF136P52737 540 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 OTPQ5XKR4 325 aa16.9■□□□□ 0.3
CLIP2-201ENST00000223398 SPDEFO95238 335 aa16.89■□□□□ 0.3
CLIP2-201ENST00000223398 CISD3P0C7P0 127 aa16.89■□□□□ 0.3
CLIP2-201ENST00000223398 CALCBP10092 127 aa16.89■□□□□ 0.3
CLIP2-201ENST00000223398 TAS2R20P59543 309 aa16.89■□□□□ 0.3
CLIP2-201ENST00000223398 RNF4P78317 190 aa16.89■□□□□ 0.3
CLIP2-201ENST00000223398 ALKBH1Q13686 389 aaKnown RBP16.89■□□□□ 0.3
CLIP2-201ENST00000223398 SYT9Q86SS6 491 aa16.89■□□□□ 0.3
CLIP2-201ENST00000223398 ZFAND1Q8TCF1 268 aa16.89■□□□□ 0.3
CLIP2-201ENST00000223398 ZMAT3Q9HA38 289 aaKnown RBP16.89■□□□□ 0.3
CLIP2-201ENST00000223398 LOXHD1Q8IVV2 1947 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 FAM157BP0CG42 384 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 CD79BP40259 229 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 OR52W1Q6IF63 320 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 ROBO4Q8WZ75 1007 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 RNF170Q96K19 258 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 EGLN1Q9GZT9 426 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 LAMA4Q16363 1823 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 LILRA5A6NI73 299 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 HTR1FP30939 366 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 ZNF93P35789 620 aaPredicted RBP16.89■□□□□ 0.29
CLIP2-201ENST00000223398 HCCSP53701 268 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 METTL11BQ5VVY1 283 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 ENTHD1Q8IYW4 607 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 EMG1Q92979 244 aaKnown RBP16.89■□□□□ 0.29
CLIP2-201ENST00000223398 hCG_1809904A0A1W2PP81 198 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 A0A1W2PPE2 198 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 A0A1W2PR64 198 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 A0A1W2PRV1 198 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 UPK1AO00322 258 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 TAS2R19P59542 299 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 CYCSP99999 105 aaKnown RBP16.89■□□□□ 0.29
CLIP2-201ENST00000223398 UBE2NLQ5JXB2 153 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 SFRP5Q5T4F7 317 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 RTL6Q6ICC9 239 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 ZBTB8AQ96BR9 441 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 LINC00615Q96LM1 132 aaPredicted RBP16.89■□□□□ 0.29
CLIP2-201ENST00000223398 ZFP57Q9NU63 452 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 ASIC5Q9NY37 505 aa16.89■□□□□ 0.29
CLIP2-201ENST00000223398 GAPDHSO14556 408 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-201ENST00000223398 PRICKLE3O43900 615 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-201ENST00000223398 GLCEO94923 617 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 S100PP25815 95 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 RPL23AP62750 156 aaKnown RBP16.88■□□□□ 0.29
CLIP2-201ENST00000223398 FAM53BQ14153 422 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 TRIP6Q15654 476 aaKnown RBP16.88■□□□□ 0.29
CLIP2-201ENST00000223398 BEST4Q8NFU0 473 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 OR4M1Q8NGD0 313 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 NIPAL2Q9H841 368 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 NOX3Q9HBY0 568 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 MED29Q9NX70 200 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 SLC5A6Q9Y289 635 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 F2RL1P55085 397 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 APOOLQ6UXV4 268 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 LGALS14Q8TCE9 139 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 C3orf49Q96BT1 292 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 BOD1Q96IK1 185 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 NRIP3Q9NQ35 241 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 B3GAT1Q9P2W7 334 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 ASH2LQ9UBL3 628 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 A0A0U1RQK1 487 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 NAP1L6A6NFF2 107 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 CTDSP2O14595 271 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 HS3ST1O14792 307 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 CYB5BO43169 146 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 ATP6V1G1O75348 118 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 HEXAP06865 529 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 SELENBP1Q13228 472 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 DLEU7Q6UYE1 221 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 Q6ZTK2 550 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 GDPD3Q7L5L3 318 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 RNF128Q8TEB7 428 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 GPR173Q9NS66 373 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 ASB4Q9Y574 426 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 NUBP2Q9Y5Y2 271 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 FUOMA2VDF0 154 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 IFNA4P05014 189 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 CELA2BP08218 269 aaPredicted RBP16.88■□□□□ 0.29
CLIP2-201ENST00000223398 HTR2AP28223 471 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 EMDP50402 254 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 MRPS10P82664 201 aaKnown RBP16.88■□□□□ 0.29
CLIP2-201ENST00000223398 OR8G1Q15617 311 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 ACKR1Q16570 336 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 KHDC1LQ5JSQ8 128 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 TMEM185AQ8NFB2 350 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 OR11G2Q8NGC1 345 aa16.88■□□□□ 0.29
CLIP2-201ENST00000223398 UBCP0CG48 685 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms