RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 HOXB1P14653 301 aaPredicted RBP11.05□□□□□ -0.64
LSM5-201ENST00000223084 RPL4P36578 427 aaKnown RBP11.05□□□□□ -0.64
LSM5-201ENST00000223084 MAGEA2P43356 314 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 ERFP50548 548 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 CDH11P55287 796 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 FXYD6P3P58550 94 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 RPL27P61353 136 aaKnown RBP11.05□□□□□ -0.64
LSM5-201ENST00000223084 FMODQ06828 376 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 PIGFQ07326 219 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 HIST3H3Q16695 136 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 DEFB113Q30KQ7 82 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 ANKDD1AQ495B1 522 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 FAM98BQ52LJ0 330 aaKnown RBP11.05□□□□□ -0.64
LSM5-201ENST00000223084 SLC22A25Q6T423 547 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 B3GLCTQ6Y288 498 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 THSD4Q6ZMP0 1018 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 C20orf204Q6ZNR8 217 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 MDP1Q86V88 176 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 MYPOPQ86VE0 399 aaPredicted RBP11.05□□□□□ -0.64
LSM5-201ENST00000223084 ADGRG5Q8IZF4 528 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 ZNF519Q8TB69 540 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 MBD6Q96DN6 1003 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 RADILQ96JH8 1075 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 SLC38A2Q96QD8 506 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 KATNB1Q9BVA0 655 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 MAGIXQ9H6Y5 334 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 NOX3Q9HBY0 568 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 VNN3Q9NY84 501 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 TMCC3Q9ULS5 477 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 SIGLEC7Q9Y286 467 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 ADAM18Q9Y3Q7 739 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 LYVE1Q9Y5Y7 322 aa11.05□□□□□ -0.64
LSM5-201ENST00000223084 NPIPB13A6NJU9 1138 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 NPIPB4C9JG80 1138 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 E7EQL1 145 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 ATP6V1G2-DDX39BF2Z307 99 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 H7C1C5 153 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 TNFRSF11BO00300 401 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 SOD3P08294 240 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 CECR9P0C854 216 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 CD79AP11912 226 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 CBR1P16152 277 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 CDAP32320 146 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 IDH3GP51553 393 aaPredicted RBP11.04□□□□□ -0.64
LSM5-201ENST00000223084 LCN6P62502 163 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 CD47Q08722 323 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 NPRL3Q12980 569 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 TAF11Q15544 211 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 ZNF627Q7L945 461 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 HDDC2Q7Z4H3 204 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 SKA3Q8IX90 412 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 ZNF611Q8N823 705 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 OR9Q2Q8NGE9 314 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 OR4C15Q8NGM1 316 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 FGFBP3Q8TAT2 258 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 NSMAFQ92636 917 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 FBXW5Q969U6 566 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 NMD3Q96D46 503 aaKnown RBP11.04□□□□□ -0.64
LSM5-201ENST00000223084 Q96M85 177 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 KCNK17Q96T54 332 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 SH3GL3Q99963 347 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 TRIM15Q9C019 465 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 KRCC1Q9NPI7 259 aaPredicted RBP11.04□□□□□ -0.64
LSM5-201ENST00000223084 TMEM38BQ9NVV0 291 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 B3GNT2Q9NY97 397 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 CISD1Q9NZ45 108 aaKnown RBP11.04□□□□□ -0.64
LSM5-201ENST00000223084 ZNF224Q9NZL3 707 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 POU2F3Q9UKI9 436 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 MOKQ9UQ07 419 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 MGAT4BQ9UQ53 548 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 LAMP3Q9UQV4 416 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 POMPQ9Y244 141 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 ATP23Q9Y6H3 246 aa11.04□□□□□ -0.64
LSM5-201ENST00000223084 TEX13CA0A0J9YWL9 993 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 AQP12BA6NM10 295 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 CENPBD1B2RD01 187 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 ARHGEF9O43307 516 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 KRT36O76013 467 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 NDUFB2O95178 105 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 IGLV1-44P01699 117 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 CD14P08571 375 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 DANCRP0C864 163 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 CALCRP30988 508 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 HMGA2P52926 109 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 FLOT2Q14254 428 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 PGGHGQ32M88 737 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 C1QTNF12Q5T7M4 302 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 OR2T5Q6IEZ7 315 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 PGBD2Q6P3X8 592 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 FAM122BQ7Z309 247 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 SPATA24Q86W54 205 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 AQP12AQ8IXF9 295 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 SLC22A24Q8N4F4 322 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 ARIH2OSQ8N7S6 290 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 OR2T29Q8NH02 315 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 GNPDA2Q8TDQ7 276 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 SMAP2Q8WU79 429 aaPredicted RBP11.03□□□□□ -0.64
LSM5-201ENST00000223084 CANT1Q8WVQ1 401 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 IGFBPL1Q8WX77 278 aa11.03□□□□□ -0.64
LSM5-201ENST00000223084 RASD2Q96D21 266 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms