RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZNF503-AS2A6NEH8 195 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 MCIDASD6RGH6 385 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 PRSS23O95084 383 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 IGHG1P01857 330 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 CRYAAP02489 173 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 PGA4P0DJD7 388 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 PGA3P0DJD8 388 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 HSD17B1P14061 328 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 FUT4P22083 530 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 ARR3P36575 388 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 DAP3P51398 398 aaKnown RBP13.08□□□□□ -0.32
PHGDH-231ENST00000641939 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.32
PHGDH-231ENST00000641939 NAAAQ02083 359 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 C11orf71Q6IPW1 123 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 HDDC2Q7Z4H3 204 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 MDP1Q86V88 176 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 RBM15BQ8NDT2 890 aaKnown RBP13.08□□□□□ -0.32
PHGDH-231ENST00000641939 MOSPD2Q8NHP6 518 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 FOXB1Q99853 325 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 BDH2Q9BUT1 245 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 GORASP2Q9H8Y8 452 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 DCAF13Q9NV06 445 aaKnown RBP13.08□□□□□ -0.32
PHGDH-231ENST00000641939 NDE1Q9NXR1 346 aa13.08□□□□□ -0.32
PHGDH-231ENST00000641939 SAMD4AQ9UPU9 718 aaKnown RBP13.08□□□□□ -0.32
PHGDH-231ENST00000641939 NIPBLQ6KC79 2804 aaeCLIP13.08□□□□□ -0.32
PHGDH-231ENST00000641939 NSD1Q96L73 2696 aaPredicted RBP13.08□□□□□ -0.32
PHGDH-231ENST00000641939 CENPBD1B2RD01 187 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 CELA3BP08861 270 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 B4GALT1P15291 398 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 TCN1P20061 433 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 APOBEC3AP31941 199 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 IDH3GP51553 393 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 CLRN1P58418 232 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 KRT72Q14CN4 511 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 LAPTM4AQ15012 233 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 ETFDHQ16134 617 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 FXNQ16595 210 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 SAMD4BQ5PRF9 694 aaKnown RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 GKAP1Q5VSY0 366 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 LRFN4Q6PJG9 635 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 C16orf89Q6UX73 402 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 ZNF730Q6ZMV8 503 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 PIWIL3Q7Z3Z3 882 aaKnown RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 TSEN54Q7Z6J9 526 aaKnown RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 NRMQ8IXM6 262 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 RNF113BQ8IZP6 322 aaKnown RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 ASB10Q8WXI3 467 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 NANOS1Q8WY41 292 aaKnown RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 CDRT15Q96T59 188 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 ANKRD19PQ9H560 264 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 SEC61A2Q9H9S3 476 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 NMNAT1Q9HAN9 279 aaPredicted RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 B3GNT2Q9NY97 397 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 STX18Q9P2W9 335 aaKnown RBP13.07□□□□□ -0.32
PHGDH-231ENST00000641939 CD300AQ9UGN4 299 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 HIF3AQ9Y2N7 669 aa13.07□□□□□ -0.32
PHGDH-231ENST00000641939 NF1P21359 2839 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 A0A087WUU8 490 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 TRIM64BA6NI03 449 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 NPIPB13A6NJU9 1138 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 NPIPB4C9JG80 1138 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 H7C1Q1 480 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 FAM107AO95990 144 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 IGHV4-39P01824 125 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 HLA-HP01893 362 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 QDPRP09417 244 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 INHBBP09529 407 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 SAGP10523 405 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-231ENST00000641939 CD79AP11912 226 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 ACADSP16219 412 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 MAKP20794 623 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 CALCRP30988 508 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 MNAT1P51948 309 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 MXRA7P84157 204 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 PRKCDQ05655 676 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 RUNX1T1Q06455 604 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 NPRL3Q12980 569 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 HIST3H3Q16695 136 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 GSG1Q2KHT4 349 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 ALG10Q5BKT4 473 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 MBOAT2Q6ZWT7 520 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 BIVMQ86UB2 503 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 MYPOPQ86VE0 399 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-231ENST00000641939 CDK20Q8IZL9 346 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 FITM2Q8N6M3 262 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 NOXO1Q8NFA2 376 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 IL17RDQ8NFM7 739 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 OR4F15Q8NGB8 312 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 COX4I2Q96KJ9 171 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 CACNG6Q9BXT2 260 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 MRPL13Q9BYD1 178 aaKnown RBP13.06□□□□□ -0.32
PHGDH-231ENST00000641939 TXNIPQ9H3M7 391 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 DENND2DQ9H6A0 471 aaPredicted RBP13.06□□□□□ -0.32
PHGDH-231ENST00000641939 NDUFAF4Q9P032 175 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 MAGEL2Q9UJ55 1249 aa13.06□□□□□ -0.32
PHGDH-231ENST00000641939 FAM32AQ9Y421 112 aaKnown RBP13.06□□□□□ -0.32
PHGDH-231ENST00000641939 IGHV2OR16-5A0A0B4J2B6 119 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms