RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 MCTS1Q9ULC4 181 aaKnown RBP8.35□□□□□ -1.07
PHGDH-228ENST00000641847 BAIAP2Q9UQB8 552 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 RASD1Q9Y272 281 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 GMPPBQ9Y5P6 360 aa8.35□□□□□ -1.07
PHGDH-228ENST00000641847 DNAJC13O75165 2243 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 SLC22A20A6NK97 555 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 E9PQ18 207 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 H0YAE9 185 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 MS4A18H0YCH9 400 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 M0R129 80 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 SLC16A6O15403 523 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 CYTIPO60759 359 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 VAMP5O95183 116 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ATE1O95260 518 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 CLIC3O95833 236 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 CD14P08571 375 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 GRK5P34947 590 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 GGT2P36268 569 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 DAP3P51398 398 aaKnown RBP8.34□□□□□ -1.07
PHGDH-228ENST00000641847 RPS6KA3P51812 740 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ERVK-25P63136 954 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ADARB1P78563 741 aaKnown RBP8.34□□□□□ -1.07
PHGDH-228ENST00000641847 C1DQ13901 141 aaKnown RBP8.34□□□□□ -1.07
PHGDH-228ENST00000641847 POU4F3Q15319 338 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ACKR1Q16570 336 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 MS4A18Q3C1V0 323 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ACSF3Q4G176 576 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-228ENST00000641847 EEF1A1P5Q5VTE0 462 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 TTC23Q5W5X9 447 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 C12orf73Q69YU5 71 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 TMEM225Q6GV28 225 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF585AQ6P3V2 769 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 PLXDC2Q6UX71 529 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 P4HA3Q7Z4N8 544 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 CCDC103Q8IW40 242 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 UEVLDQ8IX04 471 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ANKK1Q8NFD2 765 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 OR9K2Q8NGE7 335 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 FNDC9Q8TBE3 224 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 FAM81AQ8TBF8 368 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ZPLD1Q8TCW7 415 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 RNF128Q8TEB7 428 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ABHD3Q8WU67 409 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 TFAP2CQ92754 450 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ERMAPQ96PL5 475 aaPredicted RBP8.34□□□□□ -1.07
PHGDH-228ENST00000641847 SLC38A2Q96QD8 506 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 TSPAN32Q96QS1 320 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 TRIB1Q96RU8 372 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 KATNB1Q9BVA0 655 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 PRRG4Q9BZD6 226 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 PRRG3Q9BZD7 231 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 FANCFQ9NPI8 374 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 NRIP3Q9NQ35 241 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 B3GAT1Q9P2W7 334 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 CLCF1Q9UBD9 225 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 NDRG4Q9ULP0 352 aaKnown RBP8.34□□□□□ -1.07
PHGDH-228ENST00000641847 RAB26Q9ULW5 256 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ADAM18Q9Y3Q7 739 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ZNF175Q9Y473 711 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 NOX1Q9Y5S8 564 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 IER3IP1Q9Y5U9 82 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 ANK2Q01484 3957 aa8.34□□□□□ -1.07
PHGDH-228ENST00000641847 TEX13CA0A0J9YWL9 993 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 A0A1W2PRG6 482 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 FIGNL2A6NMB9 653 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 KDM4EB2RXH2 506 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-228ENST00000641847 INAFM1C9JVW0 142 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 TRAF3IP2O43734 574 aaPredicted RBP8.33□□□□□ -1.08
PHGDH-228ENST00000641847 IFNA2P01563 188 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 IGHMP01871 453 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 FCGR2AP12318 317 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 HLA-DOBP13765 273 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 APEHP13798 732 aaKnown RBP8.33□□□□□ -1.08
PHGDH-228ENST00000641847 IFNGR1P15260 489 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF43P17038 809 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 NOS3P29474 1203 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 SDHAP31040 664 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 GIPRP48546 466 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 CDC42P60953 191 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 CDK5Q00535 292 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 MYBPC1Q00872 1141 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 KRR1Q13601 381 aaKnown RBP8.33□□□□□ -1.08
PHGDH-228ENST00000641847 MELKQ14680 651 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 C1orf185Q5T7R7 199 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF691Q5VV52 312 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 ACSM5Q6NUN0 579 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 CASP12Q6UXS9 341 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 SLC35D2Q76EJ3 337 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 PXKQ7Z7A4 578 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 ADGRE4PQ86SQ3 457 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 LNX2Q8N448 690 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 RASD2Q96D21 266 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 COX4I2Q96KJ9 171 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 HRASLS5Q96KN8 279 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 Q96M85 177 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 OXGR1Q96P68 337 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 APOL4Q9BPW4 351 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 SF3B5Q9BWJ5 86 aaKnown RBP8.33□□□□□ -1.08
PHGDH-228ENST00000641847 TEX12Q9BXU0 123 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 Q9H521 79 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms