RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 GRM7Q14831 915 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 CST6Q15828 149 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 FAM74A1Q5RGS3 127 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 PDSS1Q5T2R2 415 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 DGAT2L6Q6ZPD8 337 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 ABHD13Q7L211 337 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 ZNF550Q7Z398 422 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 CLEC1AQ8NC01 280 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 OR52R1Q8NGF1 315 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 OR10AC1Q8NH08 325 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 CAPN10Q9HC96 672 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 HPF1Q9NWY4 346 aa12.45□□□□□ -0.42
PAX6-280ENST00000640872 FBXO9Q9UK97 447 aaPredicted RBP12.45□□□□□ -0.42
PAX6-280ENST00000640872 GUSBP08236 651 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 HNRNPA1P09651 372 aaKnown RBP eCLIP12.44□□□□□ -0.42
PAX6-280ENST00000640872 SLC25A1P53007 311 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 DEFA5Q01523 94 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 FCRL6Q6DN72 434 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 C7orf61Q8IZ16 206 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 BPIFCQ8NFQ6 507 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 OR4N2Q8NGD1 307 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 OR5T3Q8NGG3 340 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 ZNF417Q8TAU3 575 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 TSSK2Q96PF2 358 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 NKX6-2Q9C056 277 aaPredicted RBP12.44□□□□□ -0.42
PAX6-280ENST00000640872 LMAN2LQ9H0V9 348 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 WDR13Q9H1Z4 485 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.44□□□□□ -0.42
PAX6-280ENST00000640872 TBC1D29Q9UFV1 150 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 PURGQ9UJV8 347 aaKnown RBP12.44□□□□□ -0.42
PAX6-280ENST00000640872 A0A0D9SG52 128 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 A0A1W2PP55 124 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 MEIS3P1A6NDR6 274 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 TNFSF14O43557 240 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 PMS2P2O95744 297 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 CD8AP01732 235 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 IGFALSP35858 605 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 MC2RQ01718 297 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 DMWDQ09019 674 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 STEAP1BQ6NZ63 245 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 ZNF546Q86UE3 836 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 TMEM17Q86X19 198 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 CDC20BQ86Y33 519 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 OR51D1Q8NGF3 324 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 TMEM106AQ96A25 262 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 ADAD1Q96M93 576 aaKnown RBP12.44□□□□□ -0.42
PAX6-280ENST00000640872 POFUT1Q9H488 388 aa12.44□□□□□ -0.42
PAX6-280ENST00000640872 ZNF230Q9UIE0 474 aaPredicted RBP12.44□□□□□ -0.42
PAX6-280ENST00000640872 YBX2Q9Y2T7 364 aaKnown RBP12.44□□□□□ -0.42
PAX6-280ENST00000640872 TRAV18A0A075B6X5 111 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 PCP4L1A6NKN8 68 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 SIGLEC6O43699 453 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 ZNF432O94892 652 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 H2AFB1P0C5Y9 115 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 OR4E1P0C645 316 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 AGTR1P30556 359 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 PRPS1P60891 318 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 FGL1Q08830 312 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 ZNF141Q15928 474 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 C2orf27AQ580R0 203 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 JMJD6Q6NYC1 403 aaPredicted RBP12.43□□□□□ -0.42
PAX6-280ENST00000640872 FAM122BQ7Z309 247 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 KCNRGQ8N5I3 272 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 C12orf45Q8N5I9 185 aaPredicted RBP12.43□□□□□ -0.42
PAX6-280ENST00000640872 CAMKVQ8NCB2 501 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 OR51A4Q8NGJ6 313 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 OR2G2Q8NGZ5 317 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 HERVK_113Q902F9 699 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 DVL3Q92997 716 aaPredicted RBP12.43□□□□□ -0.42
PAX6-280ENST00000640872 LMF2Q9BU23 707 aaKnown RBP12.43□□□□□ -0.42
PAX6-280ENST00000640872 SRMSQ9H3Y6 488 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 FGF22Q9HCT0 170 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 TAS2R3Q9NYW6 316 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 TBC1D3IA0A087WXS9 549 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 OR6C74A6NCV1 312 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 NPIPB9F8W1W9 429 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 WNT11O96014 354 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 CNR1P21554 472 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 PRSS3P35030 304 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 POU3F4P49335 361 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 SSBP1Q04837 148 aaKnown RBP12.43□□□□□ -0.42
PAX6-280ENST00000640872 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.43□□□□□ -0.42
PAX6-280ENST00000640872 GABRG1Q8N1C3 465 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 SDR16C5Q8N3Y7 309 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 OR8S1Q8NH09 359 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 OR8K3Q8NH51 312 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 GPX8Q8TED1 209 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 CCDC107Q8WV48 283 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 EDAQ92838 391 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 MCHR2Q969V1 340 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 SLC25A28Q96A46 364 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 SLC22A18Q96BI1 424 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 ANKRD9Q96BM1 317 aaPredicted RBP12.43□□□□□ -0.42
PAX6-280ENST00000640872 SCARF2Q96GP6 870 aaPredicted RBP12.43□□□□□ -0.42
PAX6-280ENST00000640872 TMEM106CQ9BVX2 250 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 KCNK15Q9H427 330 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 CYB5R1Q9UHQ9 305 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 KCNK7Q9Y2U2 307 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 SPACA6W5XKT8 324 aa12.43□□□□□ -0.42
PAX6-280ENST00000640872 IGKV1D-42A0A075B6H8 117 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms