RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 PANK2Q9BZ23 570 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 SHARPINQ9H0F6 387 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 NXF5Q9H1B4 397 aaKnown RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 SAV1Q9H4B6 383 aaPredicted RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 EGLN3Q9H6Z9 239 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 DMAC2Q9NW81 257 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 FBXL4Q9UKA2 621 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 NYNRINQ9P2P1 1898 aaKnown RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 SETXQ7Z333 2677 aaKnown RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 VPS37CA5D8V6 355 aaPredicted RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 TRIM49P0CI25 452 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 TRIM49CP0CI26 452 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 MYL2P10916 166 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 GM2AP17900 193 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 MAGP20916 626 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 PRDX3P30048 256 aaKnown RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 SSTR4P31391 388 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 CCKBRP32239 447 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 CEACAM3P40198 252 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 PGFP49763 221 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 PKNOX1P55347 436 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 OR1D5P58170 312 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 POLR2GP62487 172 aaKnown RBP eCLIP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 EIF3IQ13347 325 aaKnown RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 TRAM2Q15035 370 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 C3AR1Q16581 482 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 DMRTC1Q5HYR2 192 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 BOD1L2Q8IYS8 172 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 LGI4Q8N135 537 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 SYS1Q8N2H4 156 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 EID2Q8N6I1 236 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 OR52N5Q8NH56 324 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 OR4C6Q8NH72 309 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 OSR1Q8TAX0 266 aaPredicted RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 CNIH3Q8TBE1 160 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 PHLDA1Q8WV24 401 aaPredicted RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 CAPSLQ8WWF8 208 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 FCAMRQ8WWV6 532 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 MRPL24Q96A35 216 aaKnown RBP6.35□□□□□ -1.39
NECAP1-220ENST00000639841 NUS1Q96E22 293 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 SERAC1Q96JX3 654 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 CSF3RQ99062 836 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 OR51M1Q9H341 326 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 NMUR1Q9HB89 426 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 S100A14Q9HCY8 104 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 ZFP64Q9NPA5 681 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 KLRF1Q9NZS2 232 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 PPP4R1LQ9P1A2 415 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 CSNK1G3Q9Y6M4 447 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 ZFHX4Q86UP3 3567 aa6.35□□□□□ -1.39
NECAP1-220ENST00000639841 GON4LQ3T8J9 2241 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 hDV102S1A0JD36 115 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 A8MVM7 634 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 ZNF195O14628 629 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 TOX3O15405 576 aaPredicted RBP6.34□□□□□ -1.39
NECAP1-220ENST00000639841 HLA-DRAP01903 254 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 TFAP2AP05549 437 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 H2BFMP0C1H6 154 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 MYOD1P15172 320 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 IMPDH1P20839 514 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 SYT1P21579 422 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 COMTP21964 271 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 RPL3P39023 403 aaKnown RBP6.34□□□□□ -1.39
NECAP1-220ENST00000639841 AQP2P41181 271 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 GDI2P50395 445 aaKnown RBP6.34□□□□□ -1.39
NECAP1-220ENST00000639841 CCR8P51685 355 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 KCNJ2P63252 427 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 HSF1Q00613 529 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 MFAP5Q13361 173 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 SNCBQ16143 134 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 C1orf220Q5T0J3 134 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 ZNF658Q5TYW1 1059 aaPredicted RBP6.34□□□□□ -1.39
NECAP1-220ENST00000639841 ADNP2Q6IQ32 1131 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 ZNF546Q86UE3 836 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 OR4F17Q8NGA8 305 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 OR4F5Q8NH21 305 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 OR8D1Q8WZ84 308 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 SERPINB11Q96P15 392 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 OR4F4Q96R69 305 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 GBA3Q9H227 469 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 SLC38A1Q9H2H9 487 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 FAM49BQ9NUQ9 324 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 MRPL39Q9NYK5 338 aaKnown RBP6.34□□□□□ -1.39
NECAP1-220ENST00000639841 ZDHHC2Q9UIJ5 367 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 PAM16Q9Y3D7 125 aa6.34□□□□□ -1.39
NECAP1-220ENST00000639841 COL6A6A6NMZ7 2263 aa6.34□□□□□ -1.4
NECAP1-220ENST00000639841 PLXNA2O75051 1894 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 ZCWPW2A0A1B0GU75 182 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 CCSO14618 274 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 WDR1O75083 606 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 ANXA9O76027 345 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 IGLV3-27P01718 113 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 MLF1P58340 268 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 RPS18P62269 152 aaKnown RBP6.33□□□□□ -1.4
NECAP1-220ENST00000639841 EEF1A1P68104 462 aaKnown RBP6.33□□□□□ -1.4
NECAP1-220ENST00000639841 CASP8Q14790 479 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 VMACQ2NL98 169 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 SOHLH1Q5JUK2 328 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 UTF1Q5T230 341 aa6.33□□□□□ -1.4
NECAP1-220ENST00000639841 EEF1A1P5Q5VTE0 462 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms