RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 CENPJQ9HC77 1338 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-211ENST00000638889 TET2Q6N021 2002 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-211ENST00000638889 PTPRTO14522 1441 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 K7EM74 188 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 RAMP3O60896 148 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 TCN1P20061 433 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-211ENST00000638889 ATP6V1C1P21283 382 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 OPRD1P41143 372 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 NAMPTP43490 491 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 GPR6P46095 362 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-211ENST00000638889 HTD2P86397 168 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 LOXL1Q08397 574 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-211ENST00000638889 ERCC8Q13216 396 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 POU2AF1Q16633 256 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 DUX4L9Q6RFH8 374 aaPredicted RBP1.44□□□□□ -2.18
CCDC7-211ENST00000638889 ZNF493Q6ZR52 646 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 ECHDC2Q86YB7 292 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 ZNF683Q8IZ20 524 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 FAM9BQ8IZU0 186 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 ANKFN1Q8N957 763 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 NECAP1Q8NC96 275 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 PYROXD1Q8WU10 500 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 RNF139Q8WU17 664 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 SDR42E1Q8WUS8 393 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 CXorf40BQ96DE9 158 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 NEURL3Q96EH8 262 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 CCT7Q99832 543 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 THUMPD2Q9BTF0 503 aaKnown RBP1.44□□□□□ -2.18
CCDC7-211ENST00000638889 FAIM2Q9BWQ8 316 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 MRPL47Q9HD33 250 aaKnown RBP1.44□□□□□ -2.18
CCDC7-211ENST00000638889 HMG20AQ9NP66 347 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 POLE3Q9NRF9 147 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 ZNF229Q9UJW7 825 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 KCNIP3Q9Y2W7 256 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 KIF3AQ9Y496 699 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 FBN3Q75N90 2809 aa1.44□□□□□ -2.18
CCDC7-211ENST00000638889 A0A1B0GWJ7 208 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 SGK1O00141 431 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 MED7O43513 233 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 CCNKO75909 580 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 HSMCR30P0CW71 290 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 RDXP35241 583 aaKnown RBP1.43□□□□□ -2.18
CCDC7-211ENST00000638889 SUB1P53999 127 aaKnown RBP eCLIP1.43□□□□□ -2.18
CCDC7-211ENST00000638889 SCRN3Q0VDG4 424 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 ZNF816Q0VGE8 651 aaPredicted RBP1.43□□□□□ -2.18
CCDC7-211ENST00000638889 PON3Q15166 354 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 IGFBP7Q16270 282 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 TPD52L1Q16890 204 aaPredicted RBP1.43□□□□□ -2.18
CCDC7-211ENST00000638889 SLC36A3Q495N2 470 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 FILIP1LQ4L180 1135 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 TTC23Q5W5X9 447 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 LGI3Q8N145 548 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 TRMT10AQ8TBZ6 339 aaKnown RBP1.43□□□□□ -2.18
CCDC7-211ENST00000638889 RNF157Q96PX1 679 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 RNF5Q99942 180 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 OSBPL10Q9BXB5 764 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 YY1AP1Q9H869 796 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 MCCC2Q9HCC0 563 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 FARSBQ9NSD9 589 aaKnown RBP1.43□□□□□ -2.18
CCDC7-211ENST00000638889 UFSP2Q9NUQ7 469 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 RNF14Q9UBS8 474 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 PSG8Q9UQ74 426 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 ATP10AO60312 1499 aa1.43□□□□□ -2.18
CCDC7-211ENST00000638889 IGLV1-50A0A075B6I6 118 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 IGKV3D-11A0A0A0MRZ8 115 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 IGHV3-74A0A0B4J1X5 117 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 TMEM223A0PJW6 202 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 RGSL1A5PLK6 1076 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 METTL21EPA6NDL7 271 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 ZNF850A8MQ14 1090 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 RAD51BO15315 384 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 MGRN1O60291 552 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 TOM1O60784 492 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 GABARAPO95166 117 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 SLC25A14O95258 325 aaPredicted RBP1.42□□□□□ -2.18
CCDC7-211ENST00000638889 BCHEP06276 602 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 KRT13P13646 458 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 SLC2A5P22732 501 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 CCR1P32246 355 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 RORAP35398 523 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 CSNK1A1P48729 337 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 CBX1P83916 185 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 CDC20Q12834 499 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 GINS1Q14691 196 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 SFT2D3Q587I9 215 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 RIPPLY2Q5TAB7 128 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 TMEM225Q6GV28 225 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 ABHD13Q7L211 337 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 NUDCD3Q8IVD9 361 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 GATSQ8NAP1 163 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 OR5D13Q8NGL4 314 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 L3HYPDHQ96EM0 354 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 SENP8Q96LD8 212 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 MS4A4EQ96PG1 132 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 ADAP2Q9NPF8 381 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 GPATCH2LQ9NWQ4 482 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 BFARQ9NZS9 450 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 AURKCQ9UQB9 309 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 S4R3C0 116 aa1.42□□□□□ -2.18
CCDC7-211ENST00000638889 NLRC5Q86WI3 1866 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms