RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 GALK2Q01415 458 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 HGFACQ04756 655 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 SNTB2Q13425 540 aaKnown RBP16.43■□□□□ 0.22
CLN6-221ENST00000637494 CGB2Q6NT52 195 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 NHLRC1Q6VVB1 395 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 LRRC17Q8N6Y2 441 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 RP9Q8TA86 221 aaKnown RBP16.43■□□□□ 0.22
CLN6-221ENST00000637494 TMEM54Q969K7 222 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 SGTBQ96EQ0 304 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 TPD52L3Q96J77 140 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 SORCS2Q96PQ0 1159 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 CCDC134Q9H6E4 229 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 DYNLRB1Q9NP97 96 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 B3GNT2Q9NY97 397 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 RIMS3Q9UJD0 308 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 CMAHPQ9Y471 501 aa16.43■□□□□ 0.22
CLN6-221ENST00000637494 ELOVL7A1L3X0 281 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 ZNF503-AS2A6NEH8 195 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 CCDC22O60826 627 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 IGHG1P01857 330 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 ASAH2BP0C7U1 165 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 OR8G3PP0DMU2 310 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 FUT1P19526 365 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 TNFRSF1BP20333 461 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 KDELR2P33947 212 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 CRYBA2P53672 197 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 RPS23P62266 143 aaKnown RBP16.42■□□□□ 0.22
CLN6-221ENST00000637494 MELKQ14680 651 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 TMEM249Q2WGJ8 235 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 CYBRD1Q53TN4 286 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 GKAP1Q5VSY0 366 aaPredicted RBP16.42■□□□□ 0.22
CLN6-221ENST00000637494 KRT80Q6KB66 452 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 MYPOPQ86VE0 399 aaPredicted RBP16.42■□□□□ 0.22
CLN6-221ENST00000637494 MICU2Q8IYU8 434 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 ZNF540Q8NDQ6 660 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 TMEM239Q8WW34 195 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 RCN3Q96D15 328 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 PRSS27Q9BQR3 290 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 NOX3Q9HBY0 568 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 ZNF446Q9NWS9 450 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 STX18Q9P2W9 335 aaKnown RBP16.42■□□□□ 0.22
CLN6-221ENST00000637494 MED31Q9Y3C7 131 aa16.42■□□□□ 0.22
CLN6-221ENST00000637494 PLCE1Q9P212 2302 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 LOC390937A0A1W2PQ73 354 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 DHHO43323 396 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 GPRIN2O60269 458 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 OR7A10O76100 309 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 LY6HO94772 140 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 IGF2P01344 180 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 OR1E2P47887 323 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 GIPRP48546 466 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 DAP3P51398 398 aaKnown RBP16.41■□□□□ 0.22
CLN6-221ENST00000637494 ZNF84P51523 738 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 VLDLRP98155 873 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 ST3GAL3Q11203 375 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 PIN1Q13526 163 aaPredicted RBP16.41■□□□□ 0.22
CLN6-221ENST00000637494 DPPA2Q7Z7J5 298 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 TSPYL5Q86VY4 417 aaPredicted RBP16.41■□□□□ 0.22
CLN6-221ENST00000637494 PRIMA1Q86XR5 153 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 NKAIN4Q8IVV8 208 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 SLC22A24Q8N4F4 322 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 ANKS4BQ8N8V4 417 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 TMEM255BQ8WV15 326 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 NEU4Q8WWR8 484 aaPredicted RBP16.41■□□□□ 0.22
CLN6-221ENST00000637494 RNF121Q9H920 327 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 MEPEQ9NQ76 525 aaPredicted RBP16.41■□□□□ 0.22
CLN6-221ENST00000637494 INIPQ9NRY2 104 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 ARMCX1Q9P291 453 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 CR1P17927 2039 aa16.41■□□□□ 0.22
CLN6-221ENST00000637494 FN1P02751 2386 aaKnown RBP16.4■□□□□ 0.22
CLN6-221ENST00000637494 NAV3Q8IVL0 2385 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 HTR3EA5X5Y0 456 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 GSTA4O15217 222 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 SHOX2O60902 331 aaPredicted RBP16.4■□□□□ 0.22
CLN6-221ENST00000637494 IFNA2P01563 188 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 QDPRP09417 244 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 NR2C1P13056 603 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 ZNF14P17017 642 aaPredicted RBP16.4■□□□□ 0.22
CLN6-221ENST00000637494 NR4A1P22736 598 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 MDH1P40925 334 aaKnown RBP16.4■□□□□ 0.22
CLN6-221ENST00000637494 SELENOWP63302 87 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 LSM11P83369 360 aaKnown RBP eCLIP16.4■□□□□ 0.22
CLN6-221ENST00000637494 RPL18Q07020 188 aaKnown RBP16.4■□□□□ 0.22
CLN6-221ENST00000637494 GGTLC2Q14390 218 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 CYB5R2Q6BCY4 276 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 TMEM53Q6P2H8 277 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 SVOPLQ8N434 492 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 POU5F2Q8N7G0 328 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 PFN4Q8NHR9 129 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 MS4A3Q96HJ5 214 aa16.4■□□□□ 0.22
CLN6-221ENST00000637494 SH3PXD2BA1X283 911 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 CENPBD1B2RD01 187 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 NDUFAB1O14561 156 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 PTHP01270 115 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 F13BP05160 661 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 PGA4P0DJD7 388 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 PGA3P0DJD8 388 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 COX4I1P13073 169 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 GZMKP49863 264 aa16.39■□□□□ 0.21
CLN6-221ENST00000637494 UGT2B15P54855 530 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms