RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 MAP2K4P45985 399 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 ATP5J2P56134 94 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 CARD18P57730 90 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 RGS8P57771 180 aaPredicted RBP11.19□□□□□ -0.62
CTSD-208ENST00000636843 ENTPD8Q5MY95 495 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 DCST2Q5T1A1 773 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 AP1ARQ63HQ0 302 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 C12orf73Q69YU5 71 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 FIGNL1Q6PIW4 674 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 CASP12Q6UXS9 341 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 COX18Q8N8Q8 333 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 GNPDA2Q8TDQ7 276 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 YIPF6Q96EC8 236 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 KLHL15Q96M94 604 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 NPAS1Q99742 590 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 ARMC7Q9H6L4 198 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 TIGARQ9NQ88 270 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 MKLN1Q9UL63 735 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 ZANQ9Y493 2812 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 A0A1W2PPW3 197 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 INAFM1C9JVW0 142 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 H3BN98 237 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 GABARAPO95166 117 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 BCL10O95999 233 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 PIPP12273 146 aaPredicted RBP11.19□□□□□ -0.62
CTSD-208ENST00000636843 PSMB9P28065 219 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 POU6F2P78424 691 aaPredicted RBP11.19□□□□□ -0.62
CTSD-208ENST00000636843 RNPS1Q15287 305 aaKnown RBP11.19□□□□□ -0.62
CTSD-208ENST00000636843 TMEM201Q5SNT2 666 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 TMEM236Q5W0B7 351 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 ADAM5Q6NVV9 412 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 RRM2BQ7LG56 351 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 ZER1Q7Z7L7 766 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 HMGN2P46Q86SG4 172 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 ZAR1Q86SH2 424 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 STX19Q8N4C7 294 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 B4GALNT2Q8NHY0 566 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 POC1BQ8TC44 478 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 AKAP1Q92667 903 aaKnown RBP eCLIP11.19□□□□□ -0.627e-13■■■■□ 22.5
CTSD-208ENST00000636843 ZG16BQ96DA0 208 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 SH3YL1Q96HL8 342 aaPredicted RBP11.19□□□□□ -0.62
CTSD-208ENST00000636843 MCHR1Q99705 422 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 DCUN1D5Q9BTE7 237 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 C12orf49Q9H741 205 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 TMEM185BQ9H7F4 350 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 GP6Q9HCN6 339 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 CHST2Q9Y4C5 530 aa11.19□□□□□ -0.62
CTSD-208ENST00000636843 SLC22A1O15245 554 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 KIAA0513O60268 411 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 TP53P04637 393 aaPredicted RBP11.18□□□□□ -0.62
CTSD-208ENST00000636843 ADH6P28332 368 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 RPS4XP62701 263 aaKnown RBP11.18□□□□□ -0.62
CTSD-208ENST00000636843 GPR68Q15743 365 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 ZNF239Q16600 458 aaKnown RBP11.18□□□□□ -0.62
CTSD-208ENST00000636843 ZNF836Q6ZNA1 936 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 SLC16A12Q6ZSM3 486 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 RANBP3LQ86VV4 465 aaPredicted RBP11.18□□□□□ -0.62
CTSD-208ENST00000636843 CLIP4Q8N3C7 705 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 OR8J1Q8NGP2 316 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 PIGXQ8TBF5 258 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 RNF128Q8TEB7 428 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 ACOT11Q8WXI4 607 aaPredicted RBP11.18□□□□□ -0.62
CTSD-208ENST00000636843 CPNE4Q96A23 557 aaPredicted RBP11.18□□□□□ -0.62
CTSD-208ENST00000636843 MDFIQ99750 246 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
CTSD-208ENST00000636843 RHNO1Q9BSD3 238 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 SLC25A19Q9HC21 320 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 NGBQ9NPG2 151 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 KRCC1Q9NPI7 259 aaPredicted RBP11.18□□□□□ -0.62
CTSD-208ENST00000636843 FBXO34Q9NWN3 711 aa11.18□□□□□ -0.62
CTSD-208ENST00000636843 A0A087WUU8 490 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 CLDN24A6NM45 220 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 CPSF4LA6NMK7 179 aaKnown RBP11.17□□□□□ -0.62
CTSD-208ENST00000636843 GJE1A6NN92 205 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 TPST2O60704 377 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 SOX14O95416 240 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 NID1P14543 1247 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 SFTPDP35247 375 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 TSPAN31Q12999 210 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 ETFDHQ16134 617 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 OCLNQ16625 522 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 SLC25A30Q5SVS4 291 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 MEDAGQ5VYS4 303 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 TFAP2EQ6VUC0 442 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 ZNF730Q6ZMV8 503 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 P2RY8Q86VZ1 359 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 GABRG1Q8N1C3 465 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 ZNF527Q8NB42 609 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 ROBO4Q8WZ75 1007 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 HSD17B8Q92506 261 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 S100PBPQ96BU1 408 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 TRMT61AQ96FX7 289 aaKnown RBP11.17□□□□□ -0.62
CTSD-208ENST00000636843 CDCA4Q9BXL8 241 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 PRRG3Q9BZD7 231 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 HOXD1Q9GZZ0 328 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 KLHL13Q9P2N7 655 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 LAMP3Q9UQV4 416 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 RNF115Q9Y4L5 304 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 PRR14LQ5THK1 2151 aa11.17□□□□□ -0.62
CTSD-208ENST00000636843 OVOL3O00110 214 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms