RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 OR6X1Q8NH79 312 aa15.52■□□□□ 0.08
PNKP-225ENST00000636214 NEU4Q8WWR8 484 aaPredicted RBP15.52■□□□□ 0.08
PNKP-225ENST00000636214 ZNF566Q969W8 418 aa15.52■□□□□ 0.08
PNKP-225ENST00000636214 LRRC58Q96CX6 371 aa15.52■□□□□ 0.08
PNKP-225ENST00000636214 BEX2Q9BXY8 128 aa15.52■□□□□ 0.08
PNKP-225ENST00000636214 SHARPINQ9H0F6 387 aa15.52■□□□□ 0.08
PNKP-225ENST00000636214 GLTPQ9NZD2 209 aa15.52■□□□□ 0.08
PNKP-225ENST00000636214 KCNS2Q9ULS6 477 aa15.52■□□□□ 0.08
PNKP-225ENST00000636214 SH3GLB1Q9Y371 365 aa15.52■□□□□ 0.08
PNKP-225ENST00000636214 MALRD1Q5VYJ5 2156 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 A0A1W2PRG6 482 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 ZNF503-AS2A6NEH8 195 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 FBP2O00757 339 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 BCL10O95999 233 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 NPPAP01160 153 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 IGHV4-31P0DP07 118 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 NR4A2P43354 598 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 GIPRP48546 466 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 CLRN1P58418 232 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 RAB1AP62820 205 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 ZP4Q12836 540 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 RABL3Q5HYI8 236 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 COQ5Q5HYK3 327 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 WDR88Q6ZMY6 472 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 CCDC80Q76M96 950 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 CXXC5Q7LFL8 322 aaKnown RBP15.51■□□□□ 0.07
PNKP-225ENST00000636214 PIWIL3Q7Z3Z3 882 aaKnown RBP15.51■□□□□ 0.07
PNKP-225ENST00000636214 CARM1Q86X55 608 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 SLC25A44Q96H78 314 aaPredicted RBP15.51■□□□□ 0.07
PNKP-225ENST00000636214 MDFIQ99750 246 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 PCDHAC1Q9H158 963 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 GID8Q9NWU2 228 aa15.51■□□□□ 0.07
PNKP-225ENST00000636214 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.51■□□□□ 0.073e-9■■■■■ 32.8
PNKP-225ENST00000636214 ANK3Q12955 4377 aaKnown RBP15.5■□□□□ 0.07
PNKP-225ENST00000636214 BLOC1S5-TXNDC5H3BN57 136 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 IGHG1P01857 330 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 OR8G3PP0DMU2 310 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 DAOP14920 347 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 NR4A1P22736 598 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 IFNA8P32881 189 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 MELKQ14680 651 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 REP15Q6BDI9 236 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 FAM166AQ6J272 317 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 ZNF627Q7L945 461 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 OR4D11Q8NGI4 311 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 MS4A3Q96HJ5 214 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 FOXN4Q96NZ1 517 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 POLR2J2Q9GZM3 115 aaKnown RBP15.5■□□□□ 0.07
PNKP-225ENST00000636214 POLR2J3Q9H1A7 115 aaKnown RBP15.5■□□□□ 0.07
PNKP-225ENST00000636214 RNF121Q9H920 327 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 FGFR1OP2Q9NVK5 253 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 TMEM160Q9NX00 188 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 B3GNT2Q9NY97 397 aa15.5■□□□□ 0.07
PNKP-225ENST00000636214 LOC100289279A0A1B0GTE1 492 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 VWC2LB2RUY7 222 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 LMX1BO60663 402 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 FAM157CP0CG43 387 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 HNF1AP20823 631 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 ZNF84P51523 738 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 SF3A3Q12874 501 aaKnown RBP eCLIP15.49■□□□□ 0.07
PNKP-225ENST00000636214 LRRC23Q53EV4 343 aaPredicted RBP15.49■□□□□ 0.07
PNKP-225ENST00000636214 TMEM53Q6P2H8 277 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 DPPA2Q7Z7J5 298 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 SLC22A24Q8N4F4 322 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 TMEM54Q969K7 222 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 MRPL24Q96A35 216 aaKnown RBP15.49■□□□□ 0.07
PNKP-225ENST00000636214 BPESC1Q9GZL8 116 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 CHODLQ9H9P2 273 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 TAS2R5Q9NYW4 299 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 CAPN7Q9Y6W3 813 aa15.49■□□□□ 0.07
PNKP-225ENST00000636214 RNF212BA8MTL3 300 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 M0R233 179 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 DHHO43323 396 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 SASH3O75995 380 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 OR5F1O95221 314 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 LYPD3O95274 346 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 MT-ND1P03886 318 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 THY1P04216 161 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 ADRA2AP08913 450 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 ZNF14P17017 642 aaPredicted RBP15.48■□□□□ 0.07
PNKP-225ENST00000636214 RBM34P42696 430 aaKnown RBP15.48■□□□□ 0.07
PNKP-225ENST00000636214 GZMMP51124 257 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 SELENOVP59797 346 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 KLF10Q13118 480 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 NHLRC1Q6VVB1 395 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 CDK20Q8IZL9 346 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 LRRC17Q8N6Y2 441 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 SGTBQ96EQ0 304 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 DOK1Q99704 481 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 ZNF426Q9BUY5 554 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 STX18Q9P2W9 335 aaKnown RBP15.48■□□□□ 0.07
PNKP-225ENST00000636214 SLC7A8Q9UHI5 535 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 MXRA5Q9NR99 2828 aa15.48■□□□□ 0.07
PNKP-225ENST00000636214 IGHV4-61A0A0C4DH41 118 aa15.47■□□□□ 0.07
PNKP-225ENST00000636214 LOC100653049A0A140TA62 436 aa15.47■□□□□ 0.07
PNKP-225ENST00000636214 SYNGR3O43761 229 aa15.47■□□□□ 0.07
PNKP-225ENST00000636214 KRT34O76011 436 aa15.47■□□□□ 0.07
PNKP-225ENST00000636214 STAMBPO95630 424 aa15.47■□□□□ 0.07
PNKP-225ENST00000636214 QDPRP09417 244 aa15.47■□□□□ 0.07
PNKP-225ENST00000636214 ASAH2BP0C7U1 165 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms