RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 KLF1Q13351 362 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 C19orf54Q5BKX5 351 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 GOLGA7Q7Z5G4 137 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OR2I1PQ8NGU4 316 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PDLIM2Q96JY6 352 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 WASH6PQ9NQA3 447 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PLSCR3Q9NRY6 295 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 FZD10Q9ULW2 581 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 WDR81Q562E7 1941 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 UBR1Q8IWV7 1749 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SMIM30A4D0T7 59 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF701M0R085 212 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OR2C1O95371 312 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 INHAP05111 366 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 XCR1P46094 333 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SULT1A1P50225 295 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 TAS2R38P59533 333 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ACSM1Q08AH1 577 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OR8G1Q15617 311 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SIRPB2Q5JXA9 342 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SLC35E4Q6ICL7 350 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OR8G2PQ6IF36 304 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PAQR6Q6TCH4 344 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PPP1R3BQ86XI6 285 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 EMG1Q92979 244 aaKnown RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 RAB3CQ96E17 227 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 BIRC8Q96P09 236 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PIGMQ9H3S5 423 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SLC17A7Q9P2U7 560 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ANXA10Q9UJ72 324 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 NDRG4Q9ULP0 352 aaKnown RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SPATA31A5Q5VU36 1347 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SPATA31A7Q8IWB4 1347 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 A0A1B0GUH1 482 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ZFP92A6NM28 416 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 C17orf105B2RV13 164 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 TRIM77I1YAP6 450 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 GPR37O15354 613 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PPP1R11O60927 126 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 FZD7O75084 574 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 EPOP01588 193 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 COX6CP09669 75 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PPP3CBP16298 524 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF468Q5VIY5 522 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 RANBP10Q6VN20 620 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 TFAP2EQ6VUC0 442 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 LRRC18Q8N456 261 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 WBP2Q969T9 261 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 NPAS1Q99742 590 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ATG101Q9BSB4 218 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 POPDC3Q9HBV1 291 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 MROH2AA6NES4 1674 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 COX7A2P2O60397 106 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 FOXD2O60548 495 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 LY86O95711 162 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 CTSLP07711 333 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ORM2P19652 201 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 LRRC10Q5BKY1 277 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 RNF220Q5VTB9 566 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 LHX8Q68G74 356 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 KCNG3Q8TAE7 436 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 CDS1Q92903 461 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SLC46A1Q96NT5 459 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 C1QTNF3Q9BXJ4 246 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 INIPQ9NRY2 104 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 FBXO4Q9UKT5 387 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF281Q9Y2X9 895 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 A0A1B0GTW7 788 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SH2D1BO14796 132 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF623O75123 536 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 EMP2P54851 167 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OR52H1Q8NGJ2 320 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OR13G1Q8NGZ3 307 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 DYNLRB2Q8TF09 96 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OR51B5Q9H339 312 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SYNPO2LQ9H987 977 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ABCC3O15438 1527 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 SMIM28A0A1B0GU29 152 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 S1PR4O95977 384 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 KCNE1P15382 129 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 CD40P25942 277 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ABCD3P28288 659 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 IDUAP35475 653 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 EMP3P54852 163 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 RPL24P83731 157 aaKnown RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF239Q16600 458 aaKnown RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PAQR3Q6TCH7 311 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 OR2AE1Q8NHA4 323 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 GALMQ96C23 342 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 C1orf74Q96LT6 269 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 FCRL5Q96RD9 977 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 COL25A1Q9BXS0 654 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 ALX4Q9H161 411 aaPredicted RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 CHST8Q9H2A9 424 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 MRPL15Q9P015 296 aaKnown RBP5.6□□□□□ -1.51
SCN1A-212ENST00000636194 DUSP13Q9UII6 198 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PPM1HQ9ULR3 514 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 PLAGL1Q9UM63 463 aa5.6□□□□□ -1.51
SCN1A-212ENST00000636194 K7EQS6 105 aa5.59□□□□□ -1.51
SCN1A-212ENST00000636194 KIAA0513O60268 411 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms