RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PDZK1P1A8MUH7 402 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 G3V2L1 256 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 H3BTX0 84 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 KCNK1O00180 336 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 BTN3A3O00478 584 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SCRG1O75711 98 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 CDK14O94921 469 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 MFN2O95140 757 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC25A14O95258 325 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 AMBPP02760 352 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 CCDC172P0C7W6 258 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 PIRTP0C851 137 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM228BP0C875 321 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 THRBP10828 461 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 ERGP11308 486 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 HTR2AP28223 471 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 FCGR2CP31995 323 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SOX6P35712 828 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 OPRL1P41146 370 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 CDKN2BP42772 138 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 ARFIP1P53367 373 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 HADHBP55084 474 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 HERVK_113P63132 956 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 ERVK-8P63133 956 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 OTUD4Q01804 1114 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 GRB7Q14451 532 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC17A1Q14916 467 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 PDK2Q15119 407 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 JMJD1CQ15652 2540 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC1A5Q15758 541 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 HKDC1Q2TB90 917 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 GPRC6AQ5T6X5 926 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 NEPROQ6NW34 567 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 STEAP1BQ6NZ63 245 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 BHLHB9Q6PI77 547 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SPESP1Q6UW49 350 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 NOTCH2NLQ7Z3S9 236 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 RANBP3LQ86VV4 465 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 KCNMB4Q86W47 210 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 OOSP2Q86WS3 158 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 TRAPPC5Q8IUR0 188 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 CENPLQ8N0S6 344 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 GCNT2Q8N0V5 402 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 IQCKQ8N0W5 287 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 BBS5Q8N3I7 341 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 FADS6Q8N9I5 356 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 LINC01555Q8NAE3 123 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 NUP37Q8NFH4 326 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 OR2L2Q8NH16 312 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 FBXO25Q8TCJ0 367 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 GIPC3Q8TF64 312 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 PSMF1Q92530 271 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 RAPGEF5Q92565 580 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC25A36Q96CQ1 311 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 NAP1L5Q96NT1 182 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 AGAP3Q96P47 875 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 QKIQ96PU8 341 aaKnown RBP eCLIP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 RNF157Q96PX1 679 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 RBM24Q9BX46 236 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SPATA16Q9BXB7 569 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 ERVK-6Q9BXR3 956 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 WDR13Q9H1Z4 485 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 TRABDQ9H4I3 376 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 WDR76Q9H967 626 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 WDR54Q9H977 334 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 KCNK13Q9HB14 408 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 PLEKHA3Q9HB20 300 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC25A19Q9HC21 320 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 MRPL47Q9HD33 250 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 FAM60AQ9NP50 221 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 B3GAT2Q9NPZ5 323 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 PLCXD1Q9NUJ7 323 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 RBM22Q9NW64 420 aaKnown RBP eCLIP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 TMEM181Q9P2C4 612 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 UVRAGQ9P2Y5 699 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 ANAPC7Q9UJX3 599 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 RARRES3Q9UL19 164 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 CHMP2BQ9UQN3 213 aa2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 FARSAQ9Y285 508 aaKnown RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 KLF2Q9Y5W3 355 aaPredicted RBP2.04□□□□□ -2.08
SMARCB1-208ENST00000634926 MYO7BQ6PIF6 2116 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 PHF3Q92576 2039 aaKnown RBP2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 SCN2AQ99250 2005 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 LOC105371242A0A075B767 164 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 hCG_1818297A0A087WSY0 165 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 A0A087X002 238 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 A0A0A6YYD4 124 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 GLYATL1P3A0A0U1RQE8 302 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 SLC5A10A0PJK1 596 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 HEATR9A2RTY3 570 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 OR6C74A6NCV1 312 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 OR2AG2A6NM03 316 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF724A8MTY0 619 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 MPTX1A8MV57 137 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 TMCO5BA8MYB1 307 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CFLARO15519 480 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF749O43361 778 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 CRLF1O75462 422 aa2.03□□□□□ -2.08
SMARCB1-208ENST00000634926 ZFAND5O76080 213 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms