RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ZNF85Q03923 595 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ZNF74Q16587 644 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ZNF574Q6ZN55 896 aaPredicted RBP6.8□□□□□ -1.32
PKP4-217ENST00000628904 TMEM91Q6ZNR0 172 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 GPALPP1Q8IXQ4 340 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ZNF283Q8N7M2 679 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 SYNPRQ8TBG9 265 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 RBP7Q96R05 134 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 TMEM246Q9BRR3 403 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 MIXL1Q9H2W2 232 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 FBXO8Q9NRD0 319 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 HPF1Q9NWY4 346 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ZNF69Q9UC07 566 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 PCNX2A6NKB5 2137 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 NSG1A0A0A6YYJ2 146 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 TMEM269A0A1B0GVZ9 245 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ZNF879B4DU55 563 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ADRB1P08588 477 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 PNMTP11086 282 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ATF1P18846 271 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 LTBQ06643 244 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 SF3A2Q15428 464 aaKnown RBP6.8□□□□□ -1.32
PKP4-217ENST00000628904 ZNF79Q15937 498 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 TMEM44Q2T9K0 475 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 FOXRED2Q8IWF2 684 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 MEIOBQ8N635 442 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 OR2AJ1Q8NGZ0 328 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 GRPEL2Q8TAA5 225 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 CKLFQ9UBR5 152 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 WNT16Q9UBV4 365 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 FBXL2Q9UKC9 423 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 B9D1Q9UPM9 204 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 SATB2Q9UPW6 733 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 B3GALT1Q9Y5Z6 326 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 FER1L5A0AVI2 2057 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 TRABD2BA6NFA1 517 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 CD2P06729 351 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 KLK2P20151 261 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 TGM1P22735 817 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 MANEAQ5SRI9 462 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 RPL13AP3Q6NVV1 102 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 TMEM71Q6P5X7 295 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 CD163Q86VB7 1156 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ZNF615Q8N8J6 731 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 AGBL5Q8NDL9 886 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 OR8H1Q8NGG4 311 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 OR1N1Q8NGS0 311 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 OR13C3Q8NGS6 347 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 OR13C9Q8NGT0 318 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 PTGES2Q9H7Z7 377 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 SERINC1Q9NRX5 453 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 DHDHQ9UQ10 334 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ABCA4P78363 2273 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 ESPL1Q14674 2120 aa6.8□□□□□ -1.32
PKP4-217ENST00000628904 IGHV5-10-1A0A0J9YXX1 117 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 LILRA5A6NI73 299 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 HCKP08631 526 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 HOXC4P09017 264 aaPredicted RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 PIPP12273 146 aaPredicted RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 SRMP19623 302 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 KIR2DL3P43628 341 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 PITPNBP48739 271 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 CLDN17P56750 224 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 NANOS3P60323 173 aaKnown RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 TEKQ02763 1124 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 PLAURQ03405 335 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 TPBGQ13641 420 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 FAM205BPQ63HN1 556 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ZNF544Q6NX49 715 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ZCCHC12Q6PEW1 402 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 TMPRSS11FQ6ZWK6 438 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 FAM219AQ8IW50 185 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 POGLUT1Q8NBL1 392 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 CASTOR1Q8WTX7 329 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 TMEM234Q8WY98 164 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 PMM1Q92871 262 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 CTHRC1Q96CG8 243 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 SLC25A44Q96H78 314 aaPredicted RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 TMEM41AQ96HV5 264 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 TSPAN32Q96QS1 320 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ABHD1Q96SE0 405 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 RNF32Q9H0A6 362 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 CHRDQ9H2X0 955 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 PLA2G3Q9NZ20 509 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 STMN3Q9NZ72 180 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 CCDC59Q9P031 241 aaKnown RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 EIF3KQ9UBQ5 218 aaKnown RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 FAM166BA8MTA8 275 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ORC5O43913 435 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ZFAND5O76080 213 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 TMIGD3P0DMS9 266 aaPredicted RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 GLI4P10075 376 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 EPHA8P29322 1005 aaPredicted RBP6.79□□□□□ -1.32
PKP4-217ENST00000628904 UGT2B10P36537 528 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 CASP3P42574 277 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 PTH2RP49190 550 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ACTC1P68032 377 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 ACTA1P68133 377 aa6.79□□□□□ -1.32
PKP4-217ENST00000628904 GPLD1P80108 840 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms