RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 SLC25A19Q9HC21 320 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 ENOPH1Q9UHY7 261 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 SIGLEC7Q9Y286 467 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 TRAPPC4Q9Y296 219 aa11.19□□□□□ -0.62
PNKP-217ENST00000625216 HRNRQ86YZ3 2850 aaPredicted RBP11.18□□□□□ -0.62
PNKP-217ENST00000625216 TRAV27A0A087WT01 109 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 H3BN98 237 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 SMAD9O15198 467 aaKnown RBP11.18□□□□□ -0.62
PNKP-217ENST00000625216 ZNF208O43345 1280 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 CNOT4O95628 575 aaKnown RBP11.18□□□□□ -0.62
PNKP-217ENST00000625216 PMS2P2O95744 297 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 CH25HO95992 272 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 BGLAPP02818 100 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 THBDP07204 575 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 SAGP10523 405 aaPredicted RBP11.18□□□□□ -0.62
PNKP-217ENST00000625216 TFPIP10646 304 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 RIPPLY3P57055 190 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 MYBPC1Q00872 1141 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 CD47Q08722 323 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 IL18R1Q13478 541 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 ACKR1Q16570 336 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 SFRP5Q5T4F7 317 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 THSD4Q6ZMP0 1018 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 C22orf34Q6ZV56 151 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 SSX8Q7RTT4 187 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 LRRC17Q8N6Y2 441 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 OR4Q3Q8NH05 313 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 FAM81AQ8TBF8 368 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 TEX47Q8TBZ9 253 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 STK35Q8TDR2 534 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 FBLIM1Q8WUP2 373 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 TAAR8Q969N4 342 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 DNAJA3Q96EY1 480 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 MOGAT1Q96PD6 335 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 OR52D1Q9H346 318 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 TBC1D23Q9NUY8 699 aa11.18□□□□□ -0.62
PNKP-217ENST00000625216 ING1Q9UK53 422 aaPredicted RBP11.18□□□□□ -0.62
PNKP-217ENST00000625216 MAP1AP78559 2803 aaPredicted RBP11.18□□□□□ -0.62
PNKP-217ENST00000625216 PRRC2AP48634 2157 aaKnown RBP11.18□□□□□ -0.62
PNKP-217ENST00000625216 MTORP42345 2549 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 TRAV36DV7A0A075B6V5 113 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 IGKV3D-15A0A087WSY6 115 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 IGHV3-15A0A0B4J1V0 119 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 A8MVM7 634 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 GPR171O14626 319 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 RPSAP08865 295 aaKnown RBP11.17□□□□□ -0.62
PNKP-217ENST00000625216 FOSL1P15407 271 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 KLK2P20151 261 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 LOXP28300 417 aaPredicted RBP11.17□□□□□ -0.62
PNKP-217ENST00000625216 RPS5P46782 204 aaKnown RBP11.17□□□□□ -0.62
PNKP-217ENST00000625216 OR3A2P47893 321 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 ISL1P61371 349 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 CDK5Q00535 292 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 IL5RAQ01344 420 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 ITGADQ13349 1161 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 GINS1Q14691 196 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 C1orf140Q5VVS0 124 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 SHEQ5VZ18 495 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 LAIR2Q6ISS4 152 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 KRT80Q6KB66 452 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 C20orf204Q6ZNR8 217 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 Q6ZT83 130 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 THAP5Q7Z6K1 395 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 CXorf67Q86X51 503 aaPredicted RBP11.17□□□□□ -0.62
PNKP-217ENST00000625216 ENTHD1Q8IYW4 607 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 CDK20Q8IZL9 346 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 LRRC75A-AS1Q8N1F1 130 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 LIPHQ8WWY8 451 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 HSD17B8Q92506 261 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 UBE2FQ969M7 185 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 DDIT4LQ96D03 193 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 SAMD8Q96LT4 415 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 NR1H4Q96RI1 486 aaPredicted RBP11.17□□□□□ -0.62
PNKP-217ENST00000625216 TSSK6Q9BXA6 273 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 NGBQ9NPG2 151 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 IL20Q9NYY1 176 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 EMC3Q9P0I2 261 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 AASSQ9UDR5 926 aa11.17□□□□□ -0.62
PNKP-217ENST00000625216 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.16□□□□□ -0.62
PNKP-217ENST00000625216 ARHGEF9O43307 516 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 EIF1BO60739 113 aaKnown RBP11.16□□□□□ -0.62
PNKP-217ENST00000625216 TMCC2O75069 709 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 PTP4A3O75365 173 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 AHSA1O95433 338 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 ASAH2BP0C7U1 165 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 IL32P24001 234 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 HOXC12P31275 282 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 SLC9A3P48764 834 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 RPS6KA3P51812 740 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 CHN2P52757 468 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 RPS4XP62701 263 aaKnown RBP11.16□□□□□ -0.62
PNKP-217ENST00000625216 ADAM8P78325 824 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 MAD2L1BPQ15013 274 aaPredicted RBP11.16□□□□□ -0.62
PNKP-217ENST00000625216 PGGHGQ32M88 737 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 ZBED5Q49AG3 693 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 CLEC12AQ5QGZ9 265 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 ACSM5Q6NUN0 579 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 SMARCD3Q6STE5 483 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 OAFQ86UD1 273 aa11.16□□□□□ -0.62
PNKP-217ENST00000625216 SETD9Q8NE22 299 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms