RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 MYOCOSA0A1B0GUC4 107 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 PLSCR5A0PG75 271 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 OR2M5A3KFT3 312 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 A6NDN8 102 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 H0Y8G0 127 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 AVPR2P30518 371 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 TSPAN31Q12999 210 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 GRM7Q14831 915 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF648Q5T619 568 aaPredicted RBP6.66□□□□□ -1.34
COLCA1-205ENST00000620864 C18orf63Q68DL7 685 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 FAM217AQ8IXS0 508 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 SLC35G3Q8N808 338 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 OR11L1Q8NGX0 322 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 TMIGD2Q96BF3 282 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 SEH1LQ96EE3 360 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 NPY6RQ99463 290 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 SLC30A3Q99726 388 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 WWTR1Q9GZV5 400 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 SPACA1Q9HBV2 294 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 APOBEC3BQ9UH17 382 aaKnown RBP6.66□□□□□ -1.34
COLCA1-205ENST00000620864 AK3Q9UIJ7 227 aa6.66□□□□□ -1.34
COLCA1-205ENST00000620864 MYBPHLA2RUH7 354 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 SCO2O43819 266 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 AKR7A3O95154 331 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 ALPLP05186 524 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 FUT1P19526 365 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 SRMP19623 302 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 SLC5A2P31639 672 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 VIPR2P41587 438 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 KCNJ3P48549 501 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 MRPL19P49406 292 aaKnown RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 WDR73Q6P4I2 378 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 CBLL1Q75N03 491 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 SPRED1Q7Z699 444 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 GMLQ99445 158 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 CPEB1Q9BZB8 566 aaKnown RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 GSX1Q9H4S2 264 aaPredicted RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 APOBEC3GQ9HC16 384 aaKnown RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 MYEF2Q9P2K5 600 aaKnown RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 MCTS1Q9ULC4 181 aaKnown RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 ENTPD2Q9Y5L3 495 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 DNAJC15Q9Y5T4 150 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF727A8MUV8 499 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 S1PR4O95977 384 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 ENPP1P22413 925 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 RAB13P51153 203 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 NTHL1P78549 312 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF85Q03923 595 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 FCN2Q15485 313 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 NXNL2Q5VZ03 156 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 TMPRSS11FQ6ZWK6 438 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 OVCH1Q7RTY7 1134 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 MISPQ8IVT2 679 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 UMODL1-AS1Q8N2C9 162 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 SLC39A7Q92504 469 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 ZNF778Q96MU6 729 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 NGBQ9NPG2 151 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 DNMT3BQ9UBC3 853 aaKnown RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 PSORS1C1Q9UIG5 152 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 GLOD5A6NK44 160 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 LILRB3O75022 631 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 F2P00734 622 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 PIPP12273 146 aaPredicted RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 GPR85P60893 370 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 FUT2Q10981 343 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 PDZD11Q5EBL8 140 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 TEX261Q6UWH6 196 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 C12orf54Q6X4T0 127 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 PIWIL3Q7Z3Z3 882 aaKnown RBP6.65□□□□□ -1.34
COLCA1-205ENST00000620864 CMTM8Q8IZV2 173 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 POM121Q96HA1 1249 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 UBTD1Q9HAC8 227 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 U3KQ87 197 aa6.65□□□□□ -1.34
COLCA1-205ENST00000620864 ZFP92A6NM28 416 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 STAG3L3P0CL85 134 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 AGTR2P50052 363 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 GP2P55259 537 aaKnown RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 DOC2AQ14183 400 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 ADPRMQ3LIE5 342 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 BEX5Q5H9J7 111 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 FRMPD2BQ6IN97 320 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 DNAJA3Q96EY1 480 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 JAM3Q9BX67 310 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 ATRNL1Q5VV63 1379 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 SERTM1A2A2V5 107 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 PPP1R11O60927 126 aaPredicted RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF217O75362 1048 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 PPP1CBP62140 327 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 RUNX3Q13761 415 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 LY6DQ14210 128 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 PODNL1Q6PEZ8 512 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 LSRQ86X29 649 aaPredicted RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 PLXDC1Q8IUK5 500 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM130Q8N3G9 435 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 OR2D3Q8NGH3 330 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 GPX8Q8TED1 209 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 RTP4Q96DX8 246 aa6.65□□□□□ -1.35
COLCA1-205ENST00000620864 ZMYND19Q96E35 227 aaPredicted RBP6.65□□□□□ -1.35
COLCA1-205ENST00000620864 ACTL7AQ9Y615 435 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms