RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 CTRB1P17538 263 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 RCVRNP35243 200 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 HTR3AP46098 478 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 POLR2HP52434 150 aaKnown RBP11.21□□□□□ -0.62
CIITA-212ENST00000618207 TRIM61Q5EBN2 209 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 SLC35D3Q5M8T2 416 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 FAM69AQ5T7M9 428 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 CTRB2Q6GPI1 263 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 PLET1Q6UQ28 207 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 PAMR1Q6UXH9 720 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 PRSS45Q7RTY3 260 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 FAM220AQ7Z4H9 259 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 RABEPKQ7Z6M1 372 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 SLC51BQ86UW2 128 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 UBALD2Q8IYN6 164 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 SYS1Q8N2H4 156 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 SLC43A2Q8N370 569 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 DNAAF1Q8NEP3 725 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 OR2T4Q8NH00 348 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 C12orf4Q9NQ89 552 aa11.21□□□□□ -0.62
CIITA-212ENST00000618207 NUFIP1Q9UHK0 495 aaKnown RBP11.21□□□□□ -0.62
CIITA-212ENST00000618207 ARPC4-TTLL3A0A0A6YYG9 625 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 MEN1O00255 615 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 TO15178 435 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 PIN1P1O15428 100 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 FZD7O75084 574 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 AHSA1O95433 338 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 ADRB1P08588 477 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 SPARCP09486 303 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 CD3GP09693 182 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 MAP2K3P46734 347 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 SNTA1Q13424 505 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 ASAH1Q13510 395 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 KCNJ8Q15842 424 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 CEP78Q5JTW2 689 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 PRAMEF20Q5VT98 475 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 MDGA2Q7Z553 956 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 TIGD4Q8IY51 512 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 UBQLNLQ8IYU4 475 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 OR10G3Q8NGC4 313 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 OR51A4Q8NGJ6 313 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 NSMAFQ92636 917 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 AIFM2Q9BRQ8 373 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 TEKT2Q9UIF3 430 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 OR6C70A6NIJ9 312 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 LYRM1O43325 122 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 KRT8P05787 483 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 EPXP11678 715 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 C19orf57Q0VDD7 668 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 TRAM1Q15629 374 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 STK11Q15831 433 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 SLC16A9Q7RTY1 509 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 OVCH1Q7RTY7 1134 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 GRINAQ7Z429 371 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 LRRC28Q86X40 367 aaPredicted RBP11.2□□□□□ -0.62
CIITA-212ENST00000618207 NFAM1Q8NET5 270 aaPredicted RBP11.2□□□□□ -0.62
CIITA-212ENST00000618207 RGP1Q92546 391 aaPredicted RBP11.2□□□□□ -0.62
CIITA-212ENST00000618207 SPSB2Q99619 263 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 EMC6Q9BV81 110 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 MED29Q9NX70 200 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 FRRS1LQ9P0K9 344 aa11.2□□□□□ -0.62
CIITA-212ENST00000618207 A8MVM7 634 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 ZNF593O00488 134 aaPredicted RBP11.19□□□□□ -0.62
CIITA-212ENST00000618207 ICMTO60725 284 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 SLC19A2O60779 497 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 ARL6IP5O75915 188 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 SERPINA3P01011 423 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 MAS1P04201 325 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 CTLA4P16410 223 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 SRMP19623 302 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 GALP22466 123 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 FMODQ06828 376 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 BTBD16Q32M84 506 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 TCEAL6Q6IPX3 200 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 CPEB2Q7Z5Q1 589 aaKnown RBP11.19□□□□□ -0.62
CIITA-212ENST00000618207 EXD3Q8N9H8 876 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 LILRB4Q8NHJ6 448 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 LGALS14Q8TCE9 139 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 TCEAL3Q969E4 200 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 LRFN5Q96NI6 719 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 INTS14Q96SY0 518 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 WDR77Q9BQA1 342 aaPredicted RBP11.19□□□□□ -0.62
CIITA-212ENST00000618207 SOSTQ9BQB4 213 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 METTL7AQ9H8H3 244 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 MRPL15Q9P015 296 aaKnown RBP11.19□□□□□ -0.62
CIITA-212ENST00000618207 TTC28Q96AY4 2481 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 A0A0B4J293 547 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 TMEM200CA6NKL6 621 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 PRKAR1AP10644 381 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 CFL1P23528 166 aaKnown RBP11.19□□□□□ -0.62
CIITA-212ENST00000618207 CD83Q01151 205 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 FOXF1Q12946 379 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 SQSTM1Q13501 440 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 TBRG1Q3YBR2 411 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 YOD1Q5VVQ6 348 aaPredicted RBP11.19□□□□□ -0.62
CIITA-212ENST00000618207 ZNF676Q8N7Q3 588 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 LIPHQ8WWY8 451 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 ACOT12Q8WYK0 555 aa11.19□□□□□ -0.62
CIITA-212ENST00000618207 C5orf34Q96MH7 638 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms