RNA–Protein interactions for RNA: ENST00000612341.4

SMTN-222, Transcript of smoothelin, human

APPRIS ALT2 TSL 2 BASIC

Gene SMTN, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-222	ENST00000612341	GATB	O75879	557 aa	Known RBP	11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	H2AFB2	P0C5Z0	115 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	CD38	P28907	300 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	MMP15	P51511	669 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	OR1D5	P58170	312 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	RPS4X	P62701	263 aa	Known RBP	11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	IGLV3-21	P80748	117 aa	Predicted RBP	11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	GGTLC2	Q14390	218 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	NSDHL	Q15738	373 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	SGCA	Q16586	387 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	TMPRSS12	Q86WS5	348 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	CCDC36	Q8IYA8	594 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	ZNF676	Q8N7Q3	588 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	TEX19	Q8NA77	164 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	OR5AK2	Q8NH90	309 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	SYNPR	Q8TBG9	265 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	ZNF431	Q8TF32	576 aa	Predicted RBP	11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	CHIA	Q9BZP6	476 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	NMNAT2	Q9BZQ4	307 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	NIPAL2	Q9H841	368 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	LMAN1L	Q9HAT1	526 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	EMC3	Q9P0I2	261 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	CAMK2A	Q9UQM7	478 aa		11.71	□□□□□ -0.53
SMTN-222	ENST00000612341	AKR7A3	O95154	331 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	GLA	P06280	429 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	TMIGD3	P0DMS9	266 aa	Predicted RBP	11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	IL12B	P29460	328 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	SSTR2	P30874	369 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	ST3GAL2	Q16842	350 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	MEST	Q5EB52	335 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	CHCHD2P9	Q5T1J5	151 aa	Predicted RBP	11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	KDM8	Q8N371	416 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	THAP3	Q8WTV1	239 aa	Predicted RBP	11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	NSMAF	Q92636	917 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	ATOH1	Q92858	354 aa	Predicted RBP	11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	BCL2L14	Q9BZR8	327 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	FRRS1L	Q9P0K9	344 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	FKBP7	Q9Y680	259 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341		V9GY05	133 aa		11.71	□□□□□ -0.54
SMTN-222	ENST00000612341	C2orf72	A6NCS6	295 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	CDC40	O60508	579 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	TRIM3	O75382	744 aa	Predicted RBP	11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	HOXB1	P14653	301 aa	Predicted RBP	11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	CXCR1	P25024	350 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	SDHA	P31040	664 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	CSNK1E	P49674	416 aa	Known RBP	11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	BTG1	P62324	171 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	ZNF117	Q03924	483 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	PLA2G7	Q13093	441 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	CHRDL2	Q6WN34	429 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	OVCH1	Q7RTY7	1134 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	GKN2	Q86XP6	184 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	SLC35F3	Q8IY50	421 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	OR11H4	Q8NGC9	324 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	PPP1R14A	Q96A00	147 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	MRPL48	Q96GC5	212 aa	Known RBP	11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	TSPAN32	Q96QS1	320 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	SEMA4C	Q9C0C4	833 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	NUBP2	Q9Y5Y2	271 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	IGHV1OR15-9	A0A0B4J2B8	117 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	IGHV3-20	A0A0C4DH32	117 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	SSX5	O60225	188 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	HPX	P02790	462 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	PNMT	P11086	282 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	RORA	P35398	523 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	UBXN2B	Q14CS0	331 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	UBE2NL	Q5JXB2	153 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	HLA-DQA1	Q5Y7H0	255 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	FAM199X	Q6PEV8	388 aa	Predicted RBP	11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	FAM122B	Q7Z309	247 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	PLCZ1	Q86YW0	608 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	SLC25A38	Q96DW6	304 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	SCMH1	Q96GD3	660 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	AMELY	Q99218	206 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	MESP1	Q9BRJ9	268 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	GTPBP2	Q9BX10	602 aa	Known RBP	11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	LANCL2	Q9NS86	450 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	ING4	Q9UNL4	249 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	HIF3A	Q9Y2N7	669 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	PRSS44	E7EML9	344 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	S100A6	P06703	90 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	FASLG	P48023	281 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	EFNA3	P52797	238 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	BIK	Q13323	160 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	SERTAD2	Q14140	314 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	SLC35D3	Q5M8T2	416 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	TMEM69	Q5SWH9	247 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	LRRN1	Q6UXK5	716 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	HYLS1	Q96M11	299 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	NUDT9	Q9BW91	350 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	KCNG2	Q9UJ96	466 aa		11.7	□□□□□ -0.54
SMTN-222	ENST00000612341	THADA	Q6YHU6	1953 aa		11.69	□□□□□ -0.54
SMTN-222	ENST00000612341	AIP	O00170	330 aa		11.69	□□□□□ -0.54
SMTN-222	ENST00000612341	ZNF593	O00488	134 aa	Predicted RBP	11.69	□□□□□ -0.54
SMTN-222	ENST00000612341	ITGA10	O75578	1167 aa		11.69	□□□□□ -0.54
SMTN-222	ENST00000612341	ADH7	P40394	386 aa		11.69	□□□□□ -0.54
SMTN-222	ENST00000612341	CAPZA2	P47755	286 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms