RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZNF235Q14590 738 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ELAVL1Q15717 326 aaKnown RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 HSPB2Q16082 182 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SAMD13Q5VXD3 122 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 TMEM268Q5VZI3 342 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 C22orf42Q6IC83 251 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SLC30A7Q8NEW0 376 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 OR4C5Q8NGB2 326 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 THEM6Q8WUY1 208 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ZCCHC14Q8WYQ9 949 aaKnown RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 RAB33BQ9H082 229 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 PLEKHA1Q9HB21 404 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 IKZF2Q9UKS7 526 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 FLVCR2Q9UPI3 526 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 PPP1R3CQ9UQK1 317 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 HES2Q9Y543 173 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 GBF1Q92538 1859 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ZCWPW2A0A1B0GU75 182 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 MGAT4DA6NG13 374 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 OR5H14A6NHG9 310 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SUPT3HB4E1H0 165 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 F8VVB4 439 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 F8VWA3 439 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 EEF1E1O43324 174 aaKnown RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 GRAP2O75791 330 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 NCR1O76036 304 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SOD1P00441 154 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SEMG1P04279 462 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ELFN1P0C7U0 828 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 EPHA2P29317 976 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 RPL29P47914 159 aaKnown RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 CCR8P51685 355 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 PDX1P52945 283 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ELLP55199 621 aaPredicted RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 OSTNP61366 133 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 RHOGP84095 191 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 CRMP1Q14194 572 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 UGCGQ16739 394 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 TEX38Q6PEX7 206 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ACOT7LQ6ZUV0 252 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 MED25Q71SY5 747 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 C9orf40Q8IXQ3 194 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF100Q8IYN0 542 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 COMMD1Q8N668 190 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 EID2Q8N6I1 236 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF738Q8NE65 137 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 OR52J3Q8NH60 311 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 HASPINQ8TF76 798 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 ARNTL2Q8WYA1 636 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SEMA4DQ92854 862 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SCLYQ96I15 445 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 JSRP1Q96MG2 331 aaPredicted RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SLC6A7Q99884 636 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 POLR2J2Q9GZM3 115 aaKnown RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 PORCNQ9H237 461 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 POMKQ9H5K3 350 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 RAD18Q9NS91 495 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 CLN6Q9NWW5 311 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SLC2A8Q9NY64 477 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 VAX2Q9UIW0 290 aa8.12□□□□□ -1.11
COMMD3-215ENST00000602574 SF3B6Q9Y3B4 125 aaKnown RBP8.12□□□□□ -1.11
COMMD3-215ENST00000602574 C1QTNF3-AMACRE9PGA6 284 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF749O43361 778 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 LEFTY1O75610 366 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 UBL3O95164 117 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 PDYNP01213 254 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 CD8AP01732 235 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 BMP5P22003 454 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 CORO1AP31146 461 aaKnown RBP8.11□□□□□ -1.11
COMMD3-215ENST00000602574 GABRA5P31644 462 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 CD80P33681 288 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 CASRP41180 1078 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 ART1P52961 327 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 CRYBA4P53673 196 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 MAP2K5Q13163 448 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 ZNF460Q14592 562 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 MST1LQ2TV78 715 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 SEZ6Q53EL9 994 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 NCEH1Q6PIU2 408 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 GPD1LQ8N335 351 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 KCTD6Q8NC69 237 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 ASB17Q8WXJ9 295 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 CACNG8Q8WXS5 425 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 GJD4Q96KN9 370 aaPredicted RBP8.11□□□□□ -1.11
COMMD3-215ENST00000602574 PRAP1Q96NZ9 151 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 CDK15Q96Q40 435 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 C11orf84Q9BUA3 381 aaPredicted RBP8.11□□□□□ -1.11
COMMD3-215ENST00000602574 WDR18Q9BV38 432 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 RRAGCQ9HB90 399 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 WFDC1Q9HC57 220 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 TFCP2L1Q9NZI6 479 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 TNFSF18Q9UNG2 199 aa8.11□□□□□ -1.11
COMMD3-215ENST00000602574 COL2A1P02458 1487 aaPredicted RBP8.1□□□□□ -1.11
COMMD3-215ENST00000602574 A0A087WWC5 75 aa8.1□□□□□ -1.11
COMMD3-215ENST00000602574 J3KR12 359 aa8.1□□□□□ -1.11
COMMD3-215ENST00000602574 LDB2O43679 373 aa8.1□□□□□ -1.11
COMMD3-215ENST00000602574 OR6A2O95222 327 aa8.1□□□□□ -1.11
COMMD3-215ENST00000602574 LCATP04180 440 aa8.1□□□□□ -1.11
COMMD3-215ENST00000602574 PCCBP05166 539 aa8.1□□□□□ -1.11
COMMD3-215ENST00000602574 CSNK2A2P19784 350 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms