RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-223	ENST00000600523	CD47	Q08722	323 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	TSPAN31	Q12999	210 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	MICA	Q29983	383 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	GPR139	Q6DWJ6	353 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	C1orf94	Q6P1W5	598 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	SMARCD3	Q6STE5	483 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	NOXO1	Q8NFA2	376 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	OR52L1	Q8NGH7	329 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	FANK1	Q8TC84	345 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	ASB10	Q8WXI3	467 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	RADIL	Q96JH8	1075 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	KCNS3	Q9BQ31	491 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	ALG12	Q9BV10	488 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	KATNB1	Q9BVA0	655 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	KCNN2	Q9H2S1	579 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZNF556	Q9HAH1	456 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	SLC17A5	Q9NRA2	495 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	CCM2L	Q9NUG4	571 aa	Predicted RBP	11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	MGAT4B	Q9UQ53	548 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	SIGLEC7	Q9Y286	467 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	PKDREJ	Q9NTG1	2253 aa		11.43	□□□□□ -0.58
SRRM1-223	ENST00000600523	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	CDC42EP2	O14613	210 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	AHCYL1	O43865	530 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	MGRN1	O60291	552 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	FKBP6	O75344	327 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	THBD	P07204	575 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	QDPR	P09417	244 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	PGA4	P0DJD7	388 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	PGA3	P0DJD8	388 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	FUT4	P22083	530 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	PTAFR	P25105	342 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	NOS3	P29474	1203 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	LIMS1	P48059	325 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	LGALS3BP	Q08380	585 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	TBRG1	Q3YBR2	411 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	THEM4	Q5T1C6	240 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZNF813	Q6ZN06	617 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	DPY19L2P2	Q6ZN68	376 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	ASRGL1	Q7L266	308 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZER1	Q7Z7L7	766 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	SYT14	Q8NB59	555 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	AQP11	Q8NBQ7	271 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	TMEM54	Q969K7	222 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	PLPPR2	Q96GM1	343 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	BOD1	Q96IK1	185 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZNF570	Q96NI8	536 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	FUZ	Q9BT04	418 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	SMURF2	Q9HAU4	748 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523	DNAJB9	Q9UBS3	223 aa		11.42	□□□□□ -0.58
SRRM1-223	ENST00000600523		A0A096LPE4	126 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523		A0A1W2PPZ6	126 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	FAM221A	A4D161	298 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	DEFB108A	A8MXU0	73 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	ARHGEF9	O43307	516 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	DHH	O43323	396 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	TRMU	O75648	421 aa	Known RBP	11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	HRG	P04196	525 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	OR8G3P	P0DMU2	310 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	PRF1	P14222	555 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	SDHA	P31040	664 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	ERVK-25	P63136	954 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	RFX4	Q33E94	735 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	HIKESHI	Q53FT3	197 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	ARMC4	Q5T2S8	1044 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	PGBD2	Q6P3X8	592 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	NHLRC1	Q6VVB1	395 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	DPPA2	Q7Z7J5	298 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	ADCK1	Q86TW2	530 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	IGFN1	Q86VF2	1251 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	CDC20B	Q86Y33	519 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	ARIH2OS	Q8N7S6	290 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	PAPD5	Q8NDF8	572 aa	Known RBP	11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	OR10G2	Q8NGC3	310 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	OR4C15	Q8NGM1	316 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	GIPC3	Q8TF64	312 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	BCL2L2	Q92843	193 aa	Predicted RBP	11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	LURAP1	Q96LR2	239 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	FOXB1	Q99853	325 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	BDH2	Q9BUT1	245 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	IFT27	Q9BW83	186 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	FBXL3	Q9UKT7	428 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZNF346	Q9UL40	294 aa	Known RBP	11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	RNF115	Q9Y4L5	304 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	AP4S1	Q9Y587	144 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	SLC25A15	Q9Y619	301 aa		11.41	□□□□□ -0.58
SRRM1-223	ENST00000600523	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523		A0A1W2PR80	420 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	ARRDC5	A6NEK1	342 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523		M0R1B8	84 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	KLF4	O43474	513 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	IDH3B	O43837	385 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	PTP4A3	O75365	173 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	APEH	P13798	732 aa	Known RBP	11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	NPR2	P20594	1047 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	FAS	P25445	335 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	ERF	P50548	548 aa		11.4	□□□□□ -0.58
SRRM1-223	ENST00000600523	ZNF83	P51522	516 aa		11.4	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms