RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	SERPINB7	O75635	380 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	NCR1	O76036	304 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	UBL3	O95164	117 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	LYPD3	O95274	346 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	THY1	P04216	161 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	C8B	P07358	591 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	NAT2	P11245	290 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	COL8A2	P25067	703 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	GLRX	P35754	106 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	EVX1	P49640	407 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	PCBP3	P57721	371 aa	Known RBP	9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	GALK2	Q01415	458 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	SELPLG	Q14242	412 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	MELK	Q14680	651 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	FXN	Q16595	210 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	DUSP7	Q16829	419 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	ALKBH6	Q3KRA9	238 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	SWT1	Q5T5J6	900 aa	Known RBP	9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF613	Q6PF04	617 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	TSPYL5	Q86VY4	417 aa	Predicted RBP	9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	RBM45	Q8IUH3	476 aa	Known RBP	9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	SKA3	Q8IX90	412 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	PAQR4	Q8N4S7	273 aa	Predicted RBP	9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	RFLNB	Q8N5W9	214 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	LRRC17	Q8N6Y2	441 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	OR4D11	Q8NGI4	311 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	OR6T1	Q8NGN1	323 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	OR5J2	Q8NH18	312 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	CLDND2	Q8NHS1	167 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	VANGL1	Q8TAA9	524 aa	Predicted RBP	9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	LRRC8C	Q8TDW0	803 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	TMEM54	Q969K7	222 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	YIPF5	Q969M3	257 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	ARHGDIG	Q99819	225 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	SH3GL3	Q99963	347 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	CCDC28B	Q9BUN5	200 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	OR51B6	Q9H340	312 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	DUSP13	Q9UII6	198 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	CORO2B	Q9UQ03	480 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776	ANGPT4	Q9Y264	503 aa		9.04	□□□□□ -0.96
LSM4-205	ENST00000597776		A0A1W2PPW3	197 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	FAM157A	C9JC47	383 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	CHP2	O43745	196 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	OR6A2	O95222	327 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	CH25H	O95992	272 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	MT-ATP6	P00846	226 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	SERPINA5	P05154	406 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	FAM157B	P0CG42	384 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	SAG	P10523	405 aa	Predicted RBP	9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	CCL2	P13500	99 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	GPR6	P46095	362 aa	Predicted RBP	9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	DVL1P1	P54792	670 aa	Predicted RBP	9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	MTPN	P58546	118 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	RPS23	P62266	143 aa	Known RBP	9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF74	Q16587	644 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	CYP51A1	Q16850	503 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	RUNDC3A	Q59EK9	446 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	ENTPD8	Q5MY95	495 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	BEND6	Q5SZJ8	279 aa	Predicted RBP	9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	LRFN4	Q6PJG9	635 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	LINC00114	Q6XXX2	140 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	SLC35D2	Q76EJ3	337 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	SNX32	Q86XE0	403 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	SLC22A24	Q8N4F4	322 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	C11orf65	Q8NCR3	313 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	OR6X1	Q8NH79	312 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	RDH5	Q92781	318 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	THOC1	Q96FV9	657 aa	Known RBP	9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	RACGAP1	Q9H0H5	632 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	MS4A5	Q9H3V2	200 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	ZNF275	Q9NSD4	429 aa	Predicted RBP	9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	TMEM38B	Q9NVV0	291 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	TAS2R5	Q9NYW4	299 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	TREM2	Q9NZC2	230 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776	GLTP	Q9NZD2	209 aa		9.03	□□□□□ -0.96
LSM4-205	ENST00000597776		B4DSR2	109 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776		M0QX08	132 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	PPIH	O43447	177 aa	Known RBP	9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	RNF13	O43567	381 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	FMO6P	O60774	539 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	CLPTM1	O96005	669 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	ACHE	P22303	614 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	LSP1	P33241	339 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	MAGEB1	P43366	347 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	ATP4B	P51164	291 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	ERVS71-1	P61550	626 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	AGBL2	Q5U5Z8	902 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	PIWIL3	Q7Z3Z3	882 aa	Known RBP	9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	DHDDS	Q86SQ9	333 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	GLCCI1	Q86VQ1	547 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	RETREG3	Q86VR2	466 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	SLC30A7	Q8NEW0	376 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	OR4K5	Q8NGD3	323 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	ADAMTS16	Q8TE57	1224 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	ZNF566	Q969W8	418 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	TSPAN32	Q96QS1	320 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	OCEL1	Q9H607	264 aa		9.02	□□□□□ -0.97
LSM4-205	ENST00000597776	DENND2D	Q9H6A0	471 aa	Predicted RBP	9.02	□□□□□ -0.97

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