RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 MT-ND1P03886 318 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 USF1P22415 310 aaPredicted RBP20.31■□□□□ 0.84
LSM4-204ENST00000594828 OR1E2P47887 323 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 PTDSS1P48651 473 aaKnown RBP20.31■□□□□ 0.84
LSM4-204ENST00000594828 PPOXP50336 477 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 RAB1AP62820 205 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 VLDLRP98155 873 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 PIN1Q13526 163 aaPredicted RBP20.31■□□□□ 0.84
LSM4-204ENST00000594828 MELKQ14680 651 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 KRT80Q6KB66 452 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 PIWIL3Q7Z3Z3 882 aaKnown RBP20.31■□□□□ 0.84
LSM4-204ENST00000594828 SPATA21Q7Z572 469 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 NANOGNBQ7Z5D8 188 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 NKAIN4Q8IVV8 208 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 MS4A3Q96HJ5 214 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 ZNF75AQ96N20 296 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 DOK1Q99704 481 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 RAB1BQ9H0U4 201 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 ZNF224Q9NZL3 707 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 RIMS3Q9UJD0 308 aa20.31■□□□□ 0.84
LSM4-204ENST00000594828 FAM220BPB1ANY3 271 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 NDUFS8O00217 210 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 OR5F1O95221 314 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 RAB36O95755 333 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 BCL10O95999 233 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 ZNF14P17017 642 aaPredicted RBP20.3■□□□□ 0.84
LSM4-204ENST00000594828 FUT1P19526 365 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 NR4A1P22736 598 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 KDELR2P33947 212 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 RBM34P42696 430 aaKnown RBP20.3■□□□□ 0.84
LSM4-204ENST00000594828 GIPRP48546 466 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 SNTB2Q13425 540 aaKnown RBP20.3■□□□□ 0.84
LSM4-204ENST00000594828 CYBRD1Q53TN4 286 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 HSP90B2PQ58FF3 399 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 LRFN4Q6PJG9 635 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 HIPK1Q86Z02 1210 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 SVOPLQ8N434 492 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 OR2T12Q8NG77 320 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 PIMREGQ9BSJ6 248 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 CCDC134Q9H6E4 229 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 MYOZ1Q9NP98 299 aaPredicted RBP20.3■□□□□ 0.84
LSM4-204ENST00000594828 SPEF1Q9Y4P9 236 aa20.3■□□□□ 0.84
LSM4-204ENST00000594828 CHD3Q12873 2000 aaKnown RBP20.29■□□□□ 0.84
LSM4-204ENST00000594828 LOC390937A0A1W2PQ73 354 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 TMEM129A0AVI4 362 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 VWC2LB2RUY7 222 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 SLC22A2O15244 555 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 UBL3O95164 117 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 UGT2B15P54855 530 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 LSM11P83369 360 aaKnown RBP eCLIP20.29■□□□□ 0.84
LSM4-204ENST00000594828 CARTPTQ16568 116 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 LRRC23Q53EV4 343 aaPredicted RBP20.29■□□□□ 0.84
LSM4-204ENST00000594828 C6orf52Q5T4I8 152 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 SKA3Q8IX90 412 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 PFN4Q8NHR9 129 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 TMEM255BQ8WV15 326 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 TMEM239Q8WW34 195 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 ARMCX1Q9P291 453 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 CMAHPQ9Y471 501 aa20.29■□□□□ 0.84
LSM4-204ENST00000594828 SH3PXD2BA1X283 911 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 OR7A10O76100 309 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 ERCC1P07992 297 aaPredicted RBP20.28■□□□□ 0.84
LSM4-204ENST00000594828 PGA4P0DJD7 388 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 PGA3P0DJD8 388 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 ZNF35P13682 527 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 NR4A2P43354 598 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 RPL18Q07020 188 aaKnown RBP20.28■□□□□ 0.84
LSM4-204ENST00000594828 CYB5R2Q6BCY4 276 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 MICU2Q8IYU8 434 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 SLC22A24Q8N4F4 322 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 POU5F2Q8N7G0 328 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 RCN3Q96D15 328 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 SGTBQ96EQ0 304 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 TPD52L3Q96J77 140 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 FOXN4Q96NZ1 517 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 FBXL3Q9UKT7 428 aa20.28■□□□□ 0.84
LSM4-204ENST00000594828 A0A1W2PRG6 482 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 ELOVL7A1L3X0 281 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 DHHO43323 396 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 ENTPD5O75356 428 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 IGF2P01344 180 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 IGHG1P01857 330 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 F13BP05160 661 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 QDPRP09417 244 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 PATE4P0C8F1 98 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 OR8G3PP0DMU2 310 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 THRBP10828 461 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 SELENOWP63302 87 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 GGTLC2Q14390 218 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 ZCCHC24Q8N2G6 241 aaKnown RBP20.27■□□□□ 0.84
LSM4-204ENST00000594828 RP9Q8TA86 221 aaKnown RBP20.27■□□□□ 0.84
LSM4-204ENST00000594828 NEU4Q8WWR8 484 aaPredicted RBP20.27■□□□□ 0.84
LSM4-204ENST00000594828 DYNLRB1Q9NP97 96 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 C20orf141Q9NUB4 165 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 TMEM38BQ9NVV0 291 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 AP3M1Q9Y2T2 418 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 MED31Q9Y3C7 131 aa20.27■□□□□ 0.84
LSM4-204ENST00000594828 JMJD1CQ15652 2540 aa20.26■□□□□ 0.83
LSM4-204ENST00000594828 FARS2O95363 451 aaKnown RBP20.26■□□□□ 0.83
LSM4-204ENST00000594828 AQP2P41181 271 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms