RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 STEAP3Q658P3 488 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 SLC25A25Q6KCM7 469 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 NIPAL3Q6P499 406 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 YRDCQ86U90 279 aaKnown RBP11.87□□□□□ -0.51
VRK3-205ENST00000593919 GID4Q8IVV7 300 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 KLHL36Q8N4N3 616 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 CYB561A3Q8NBI2 242 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 SDR9C7Q8NEX9 313 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 OR14L1PQ8NHC6 308 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 RASD2Q96D21 266 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 TM9SF2Q99805 663 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 HCAR1Q9BXC0 346 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.87□□□□□ -0.51
VRK3-205ENST00000593919 FN3KQ9H479 309 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 ZNF703Q9H7S9 590 aaPredicted RBP11.87□□□□□ -0.51
VRK3-205ENST00000593919 ISYNA1Q9NPH2 558 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 CAB39Q9Y376 341 aaPredicted RBP11.87□□□□□ -0.51
VRK3-205ENST00000593919 CSAG2Q9Y5P2 127 aa11.87□□□□□ -0.51
VRK3-205ENST00000593919 NCOR2Q9Y618 2525 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 A0A075B6Q4 140 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 SMIM30A4D0T7 59 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 PLPP3O14495 311 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 TRAPPC6AO75865 159 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 LALBAP00709 142 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 CD46P15529 392 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 AHCYP23526 432 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 FKBP2P26885 142 aaKnown RBP11.86□□□□□ -0.51
VRK3-205ENST00000593919 B3GALT5-AS1P59052 145 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 TPBGQ13641 420 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 CRMP1Q14194 572 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 KLHL12Q53G59 568 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 CCDC190Q86UF4 302 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 OR52E2Q8NGJ4 325 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 OR4K13Q8NH42 304 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 SPRYD4Q8WW59 207 aaPredicted RBP11.86□□□□□ -0.51
VRK3-205ENST00000593919 Q96M85 177 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 C5orf34Q96MH7 638 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 TBX5Q99593 518 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 TTTY12Q9BZ98 90 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 ERVK13-1Q9NX77 482 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 SF3B6Q9Y3B4 125 aaKnown RBP11.86□□□□□ -0.51
VRK3-205ENST00000593919 BSNQ9UPA5 3926 aa11.86□□□□□ -0.51
VRK3-205ENST00000593919 TEX13CA0A0J9YWL9 993 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 RNF13O43567 381 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 IDH3BO43837 385 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 SERPINI2O75830 405 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 CEACAM4O75871 244 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 IFNGP01579 166 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 IGHA1P01876 353 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 APEHP13798 732 aaKnown RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 PAICSP22234 425 aaKnown RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 SDHAP31040 664 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 TNFSF10P50591 281 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 RPS7P62081 194 aaKnown RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 RUNX1T1Q06455 604 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 HNRNPA0Q13151 305 aaKnown RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 WIPI1Q5MNZ9 446 aaPredicted RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 IGFL2Q6UWQ7 119 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 MEPCEQ7L2J0 689 aaKnown RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 TMEM99Q8N816 258 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 SCAIQ8N9R8 606 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 POC5Q8NA72 575 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 SYT14Q8NB59 555 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 FAM98AQ8NCA5 519 aaKnown RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 SLC37A3Q8NCC5 494 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 ZNF485Q8NCK3 441 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 LSM14AQ8ND56 463 aaKnown RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 SMPDL3BQ92485 455 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 PTP4A1Q93096 173 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 OR2B2Q9GZK3 357 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 NDEL1Q9GZM8 345 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 ALKBH4Q9NXW9 302 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 SLC6A5Q9Y345 797 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 MRPS18CQ9Y3D5 142 aaKnown RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 HDGFL3Q9Y3E1 203 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 CHD8Q9HCK8 2581 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 ISPDA4D126 451 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 PRR23D1E9PI22 279 aaPredicted RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 FZD7O75084 574 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 AKR7A3O95154 331 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 OR6A2O95222 327 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 PLGP00747 810 aaPredicted RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 PRR23D2P0DMB1 279 aaPredicted RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 GABRA5P31644 462 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 TNFSF8P32971 234 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 DIO1P49895 249 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 MEOX1P50221 254 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 SLC16A1P53985 500 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 FABP5Q01469 135 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 TLE3Q04726 772 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 PUDPQ08623 228 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 ZNF766Q5HY98 468 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 H1FNTQ75WM6 255 aaPredicted RBP11.85□□□□□ -0.51
VRK3-205ENST00000593919 SPACA3Q8IXA5 215 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 KDM8Q8N371 416 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 HTRA1Q92743 480 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 SCMH1Q96GD3 660 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 KCTD7Q96MP8 289 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 TSPAN32Q96QS1 320 aa11.85□□□□□ -0.51
VRK3-205ENST00000593919 NMNAT3Q96T66 252 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms