RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PXKQ7Z7A4 578 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 CROCCP2Q86T23 111 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 C10orf53Q8N6V4 93 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 LRRC37BQ96QE4 947 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 TMEM43Q9BTV4 400 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 DENND2DQ9H6A0 471 aaPredicted RBP14.01□□□□□ -0.17
LIG1-205ENST00000593425 SLC7A8Q9UHI5 535 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 DUSP13Q9UII6 198 aa14.01□□□□□ -0.17
LIG1-205ENST00000593425 A0A1W2PPW3 197 aa14□□□□□ -0.17
LIG1-205ENST00000593425 M0R3H8 397 aa14□□□□□ -0.17
LIG1-205ENST00000593425 ADORA3P0DMS8 318 aa14□□□□□ -0.17
LIG1-205ENST00000593425 MAGEB1P43366 347 aa14□□□□□ -0.17
LIG1-205ENST00000593425 SLC18A1P54219 525 aa14□□□□□ -0.17
LIG1-205ENST00000593425 LMO4P61968 165 aa14□□□□□ -0.17
LIG1-205ENST00000593425 BLOC1S3Q6QNY0 202 aa14□□□□□ -0.17
LIG1-205ENST00000593425 SNX32Q86XE0 403 aa14□□□□□ -0.17
LIG1-205ENST00000593425 PAQR4Q8N4S7 273 aaPredicted RBP14□□□□□ -0.17
LIG1-205ENST00000593425 OR5J2Q8NH18 312 aa14□□□□□ -0.17
LIG1-205ENST00000593425 TMEM54Q969K7 222 aa14□□□□□ -0.17
LIG1-205ENST00000593425 SPDL1Q96EA4 605 aa14□□□□□ -0.17
LIG1-205ENST00000593425 TSPAN32Q96QS1 320 aa14□□□□□ -0.17
LIG1-205ENST00000593425 TMEM38AQ9H6F2 299 aa14□□□□□ -0.17
LIG1-205ENST00000593425 SLC52A3Q9NQ40 469 aa14□□□□□ -0.17
LIG1-205ENST00000593425 GRIP1Q9Y3R0 1128 aa14□□□□□ -0.17
LIG1-205ENST00000593425 GMEB1Q9Y692 573 aa14□□□□□ -0.17
LIG1-205ENST00000593425 DYSFO75923 2080 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 A0A0A6YYJ9 748 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 PPIHO43447 177 aaKnown RBP13.99□□□□□ -0.17
LIG1-205ENST00000593425 CLPTM1O96005 669 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 SERPINA5P05154 406 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 FAM157BP0CG42 384 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 CCL2P13500 99 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 TMEM33P57088 247 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 STX1BP61266 288 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 MAGOHP61326 146 aaKnown RBP13.99□□□□□ -0.17
LIG1-205ENST00000593425 ERVS71-1P61550 626 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 MELKQ14680 651 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 REP15Q6BDI9 236 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 RGS7BPQ6MZT1 257 aaPredicted RBP13.99□□□□□ -0.17
LIG1-205ENST00000593425 LINC00114Q6XXX2 140 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 RANBP3LQ86VV4 465 aaPredicted RBP13.99□□□□□ -0.17
LIG1-205ENST00000593425 SLC22A24Q8N4F4 322 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 SMYD1Q8NB12 490 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 OR51F2Q8NH61 342 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 ZFAND2BQ8WV99 257 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 EBF4Q9BQW3 602 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 ZNF385DQ9H6B1 395 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 NKIRAS1Q9NYS0 192 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 GLTPQ9NZD2 209 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 CCDC167Q9P0B6 97 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 SLC13A4Q9UKG4 626 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 FBXL3Q9UKT7 428 aa13.99□□□□□ -0.17
LIG1-205ENST00000593425 PRORSD1PA6NEY8 169 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 ZNF500O60304 480 aaPredicted RBP13.98□□□□□ -0.17
LIG1-205ENST00000593425 CDC14BO60729 498 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 MFN2O95140 757 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 MT-ATP6P00846 226 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 AVPP01185 164 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 GPX2P18283 190 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 PPIBP23284 216 aaKnown RBP13.98□□□□□ -0.17
LIG1-205ENST00000593425 SLC6A2P23975 617 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 LSP1P33241 339 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 MRPS11P82912 194 aaKnown RBP13.98□□□□□ -0.17
LIG1-205ENST00000593425 NPTX1Q15818 432 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 NKPD1Q17RQ9 610 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 SWT1Q5T5J6 900 aaKnown RBP13.98□□□□□ -0.17
LIG1-205ENST00000593425 SHQ1Q6PI26 577 aaKnown RBP13.98□□□□□ -0.17
LIG1-205ENST00000593425 LRFN4Q6PJG9 635 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 C1orf229Q6ZS94 237 aaPredicted RBP13.98□□□□□ -0.17
LIG1-205ENST00000593425 SLC35D2Q76EJ3 337 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 PIWIL3Q7Z3Z3 882 aaKnown RBP13.98□□□□□ -0.17
LIG1-205ENST00000593425 ARMC8Q8IUR7 673 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 HIPK4Q8NE63 616 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 SLC30A7Q8NEW0 376 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 OR6X1Q8NH79 312 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 ZNF607Q96SK3 696 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 MCHR1Q99705 422 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 ARHGDIGQ99819 225 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 SH3GL3Q99963 347 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 OR51B6Q9H340 312 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 TCF7L2Q9NQB0 619 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 TMEM38BQ9NVV0 291 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 TAAR3PQ9P1P4 343 aa13.98□□□□□ -0.17
LIG1-205ENST00000593425 ZNF346Q9UL40 294 aaKnown RBP13.98□□□□□ -0.17
LIG1-205ENST00000593425 POLR3GO15318 223 aaPredicted RBP13.97□□□□□ -0.17
LIG1-205ENST00000593425 CHP2O43745 196 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 SERPINB7O75635 380 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 OPN1SWP03999 348 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 THY1P04216 161 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 ACTG1P63261 375 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 ZNF74Q16587 644 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 AVPI1Q5T686 147 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 ZNF613Q6PF04 617 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 BHLHE22Q8NFJ8 381 aaPredicted RBP13.97□□□□□ -0.17
LIG1-205ENST00000593425 TLCD1Q96CP7 247 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 CPPED1Q9BRF8 314 aaPredicted RBP13.97□□□□□ -0.17
LIG1-205ENST00000593425 ZNF416Q9BWM5 594 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 G6PC2Q9NQR9 355 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 TAS2R5Q9NYW4 299 aa13.97□□□□□ -0.17
LIG1-205ENST00000593425 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms