RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 PODNL1Q6PEZ8 512 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 CXXC5Q7LFL8 322 aaKnown RBP14.04□□□□□ -0.16
CIRBP-241ENST00000593048 SPATA24Q86W54 205 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 PQLC1Q8N2U9 271 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 SMYD1Q8NB12 490 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 ADPRHL1Q8NDY3 354 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 OR4F15Q8NGB8 312 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 OR6S1Q8NH40 331 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 NANOS1Q8WY41 292 aaKnown RBP14.04□□□□□ -0.16
CIRBP-241ENST00000593048 OR2M2Q96R28 347 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 KCNK17Q96T54 332 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 RSPO3Q9BXY4 272 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-241ENST00000593048 NELFAQ9H3P2 528 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 KAT8Q9H7Z6 458 aaKnown RBP14.04□□□□□ -0.16
CIRBP-241ENST00000593048 YY1AP1Q9H869 796 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 B3GAT2Q9NPZ5 323 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 CRNNQ9UBG3 495 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-241ENST00000593048 NKX1-2Q9UD57 310 aaPredicted RBP14.04□□□□□ -0.16
CIRBP-241ENST00000593048 LRRC42Q9Y546 428 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 AP4S1Q9Y587 144 aa14.04□□□□□ -0.16
CIRBP-241ENST00000593048 A0A0B4J2E0 115 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 LOC102725191A0A1B0GVB3 256 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 A0A1B0GX12 115 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 MS4A18H0YCH9 400 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 CBR1P16152 277 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 AHCYP23526 432 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 IDH3GP51553 393 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-241ENST00000593048 CDH12P55289 794 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 VLDLRP98155 873 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 POU3F1Q03052 451 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-241ENST00000593048 ADRM1Q16186 407 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 MS4A18Q3C1V0 323 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 C6orf52Q5T4I8 152 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 CYB5R2Q6BCY4 276 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 CALHM3Q86XJ0 350 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 CCDC36Q8IYA8 594 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 FAM169BQ8N8A8 192 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 SCAIQ8N9R8 606 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 C11orf65Q8NCR3 313 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 PAPD5Q8NDF8 572 aaKnown RBP14.03□□□□□ -0.16
CIRBP-241ENST00000593048 OR2T12Q8NG77 320 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 ZNF583Q96ND8 569 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 SORCS2Q96PQ0 1159 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 MCHR1Q99705 422 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 CPPED1Q9BRF8 314 aaPredicted RBP14.03□□□□□ -0.16
CIRBP-241ENST00000593048 PIMREGQ9BSJ6 248 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 EMC6Q9BV81 110 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 USP22Q9UPT9 525 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 CHD3Q12873 2000 aaKnown RBP14.03□□□□□ -0.16
CIRBP-241ENST00000593048 HEATR1Q9H583 2144 aaKnown RBP14.03□□□□□ -0.16
CIRBP-241ENST00000593048 STAB1Q9NY15 2570 aa14.03□□□□□ -0.16
CIRBP-241ENST00000593048 ALPK2Q86TB3 2170 aa14.02□□□□□ -0.16
CIRBP-241ENST00000593048 CR1P17927 2039 aa14.02□□□□□ -0.16
CIRBP-241ENST00000593048 A0A096LNT2 108 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 ELOVL7A1L3X0 281 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 ZNF726A6NNF4 738 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 ZNF99A8MXY4 864 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-241ENST00000593048 H0YJX3 145 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 H3BNX3 289 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 ARPC2O15144 300 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 TRAF3IP2O43734 574 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-241ENST00000593048 FZD7O75084 574 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 SERPINI2O75830 405 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 SEC14L2O76054 403 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 MFN2O95140 757 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 IGKV3-15P01624 115 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 IGLV1-44P01699 117 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 BGLAPP02818 100 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 CELA3BP08861 270 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 HLA-DOBP13765 273 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 CALCRP30988 508 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 ARR3P36575 388 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.17
CIRBP-241ENST00000593048 RBBP4Q09028 425 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 GGTLC2Q14390 218 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 ADIPOQQ15848 244 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 RABL3Q5HYI8 236 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 MDP1Q86V88 176 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 SLC30A8Q8IWU4 369 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 RNF148Q8N7C7 305 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 ZNF837Q96EG3 531 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-241ENST00000593048 NSMCE2Q96MF7 247 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 RAB1BQ9H0U4 201 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 SEC61A2Q9H9S3 476 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 FBXO9Q9UK97 447 aaPredicted RBP14.02□□□□□ -0.17
CIRBP-241ENST00000593048 POFUT2Q9Y2G5 429 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 NOX1Q9Y5S8 564 aa14.02□□□□□ -0.17
CIRBP-241ENST00000593048 SLC35F4A4IF30 521 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 M0QX08 132 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 M0R3H8 397 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 NDUFS8O00217 210 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 TPST2O60704 377 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 OR6A2O95222 327 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 HPRP00739 348 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 OPN1SWP03999 348 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 ERCC1P07992 297 aaPredicted RBP14.01□□□□□ -0.17
CIRBP-241ENST00000593048 CD79AP11912 226 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 TCN1P20061 433 aaPredicted RBP14.01□□□□□ -0.17
CIRBP-241ENST00000593048 MTPNP58546 118 aa14.01□□□□□ -0.17
CIRBP-241ENST00000593048 PUDPQ08623 228 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 266.3 ms