RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CHMP1BQ7LBR1 199 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 OR2T4Q8NH00 348 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 TAAR6Q96RI8 345 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 SIGLEC11Q96RL6 698 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 SF3B5Q9BWJ5 86 aaKnown RBP19.87■□□□□ 0.77
ATG4D-209ENST00000588857 SYT4Q9H2B2 425 aa19.87■□□□□ 0.77
ATG4D-209ENST00000588857 CCDC182A6NF36 153 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 RAB36O95755 333 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 MVKQ03426 396 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 NEDD8Q15843 81 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 PLEKHN1Q494U1 663 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-209ENST00000588857 SLC35D3Q5M8T2 416 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 EEF1A1P5Q5VTE0 462 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 NHLRC1Q6VVB1 395 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 B3GLCTQ6Y288 498 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 PM20D2Q8IYS1 436 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 OR52I1Q8NGK6 324 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 ZNF845Q96IR2 970 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-209ENST00000588857 TIMP4Q99727 224 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 SRA1Q9HD15 236 aaKnown RBP19.86■□□□□ 0.77
ATG4D-209ENST00000588857 VSX1Q9NZR4 365 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-209ENST00000588857 SPRR3Q9UBC9 169 aa19.86■□□□□ 0.77
ATG4D-209ENST00000588857 APOL3O95236 402 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 SYNGR4O95473 234 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 CPN1P15169 458 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 GSTT1P30711 240 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 EMX1Q04741 257 aaPredicted RBP19.85■□□□□ 0.77
ATG4D-209ENST00000588857 DBPQ10586 325 aaPredicted RBP19.85■□□□□ 0.77
ATG4D-209ENST00000588857 SLC17A1Q14916 467 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 PROKR2Q8NFJ6 384 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 OR9K2Q8NGE7 335 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 OR51L1Q8NGJ5 315 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 OR51G2Q8NGK0 314 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 C9orf43Q8TAL5 461 aaPredicted RBP19.85■□□□□ 0.77
ATG4D-209ENST00000588857 ROBO4Q8WZ75 1007 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 KISS1RQ969F8 398 aaPredicted RBP19.85■□□□□ 0.77
ATG4D-209ENST00000588857 EMC6Q9BV81 110 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 CDCA4Q9BXL8 241 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 FGF20Q9NP95 211 aaPredicted RBP19.85■□□□□ 0.77
ATG4D-209ENST00000588857 ZNF71Q9NQZ8 489 aaPredicted RBP19.85■□□□□ 0.77
ATG4D-209ENST00000588857 HAO2Q9NYQ3 351 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 DIMT1Q9UNQ2 313 aaKnown RBP19.85■□□□□ 0.77
ATG4D-209ENST00000588857 MOKQ9UQ07 419 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 PCDHGB1Q9Y5G3 927 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 PIEZO2Q9H5I5 2752 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 ATRXP46100 2492 aa19.85■□□□□ 0.77
ATG4D-209ENST00000588857 SLC22A23A1A5C7 686 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 ZNF726A6NNF4 738 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 AHCYL1O43865 530 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 C1QL1O75973 258 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 CRYABP02511 175 aaKnown RBP19.84■□□□□ 0.77
ATG4D-209ENST00000588857 FAM87AP0C7U9 286 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 DCKP27707 260 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 RUNX1T1Q06455 604 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 CREB3L2Q70SY1 520 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 FCRLAQ7L513 359 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 SYT14Q8NB59 555 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 OR6K6Q8NGW6 343 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 OR6X1Q8NH79 312 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 ADAD1Q96M93 576 aaKnown RBP19.84■□□□□ 0.77
ATG4D-209ENST00000588857 TSSK2Q96PF2 358 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 RERGLQ9H628 205 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 TNFRSF10DQ9UBN6 386 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 MCTS1Q9ULC4 181 aaKnown RBP19.84■□□□□ 0.77
ATG4D-209ENST00000588857 CAMK2AQ9UQM7 478 aa19.84■□□□□ 0.77
ATG4D-209ENST00000588857 EXOGQ9Y2C4 368 aaKnown RBP19.84■□□□□ 0.77
ATG4D-209ENST00000588857 A0A1B0GVC2 190 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 SLC35F4A4IF30 521 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 TRMUO75648 421 aaKnown RBP19.83■□□□□ 0.77
ATG4D-209ENST00000588857 GLCEO94923 617 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 MYL12AP19105 171 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 PYCR1P32322 319 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 MAP2K4P45985 399 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 CLDN17P56750 224 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 POU4F2Q12837 409 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 SHFQ7M4L6 423 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 SIAH3Q8IW03 269 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 OR6V1Q8N148 313 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 OR4F15Q8NGB8 312 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 ZMYND19Q96E35 227 aaPredicted RBP19.83■□□□□ 0.77
ATG4D-209ENST00000588857 SLC25A44Q96H78 314 aaPredicted RBP19.83■□□□□ 0.77
ATG4D-209ENST00000588857 KCNK17Q96T54 332 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 ALG12Q9BV10 488 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 NUAK2Q9H093 628 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 FKBP7Q9Y680 259 aa19.83■□□□□ 0.77
ATG4D-209ENST00000588857 AQP7O14520 342 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 IGHG1P01857 330 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 PCMT1P22061 227 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 CRABP1P29762 137 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 CLRN1P58418 232 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 C3AR1Q16581 482 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 ABLIM2Q6H8Q1 611 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 ZNF843Q8N446 348 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 PNPLA2Q96AD5 504 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 WDYHV1Q96HA8 205 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 PRRG4Q9BZD6 226 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 ACOT13Q9NPJ3 140 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 CHCHD3Q9NX63 227 aaKnown RBP19.83■□□□□ 0.76
ATG4D-209ENST00000588857 LUZP4Q9P127 313 aa19.83■□□□□ 0.76
ATG4D-209ENST00000588857 TUBD1Q9UJT1 453 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms