RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 SLC16A1P53985 500 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 CSNK2BP67870 215 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 MVKQ03426 396 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 FMODQ06828 376 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 RASGEF1BQ0VAM2 473 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 KLRB1Q12918 225 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 CAMK2DQ13557 499 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 CARD17Q5XLA6 110 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 FAM205BPQ63HN1 556 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 PCSK4Q6UW60 755 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 CHMP1BQ7LBR1 199 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 SHFQ7M4L6 423 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 ADGRE4PQ86SQ3 457 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 OR6V1Q8N148 313 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 SYT14Q8NB59 555 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 TSPAN14Q8NG11 270 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 OR6X1Q8NH79 312 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 FAR1Q8WVX9 515 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 SNRNP40Q96DI7 357 aaKnown RBP10.05□□□□□ -0.8
VMP1-207ENST00000588131 LGALS12Q96DT0 336 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 RNFT2Q96EX2 444 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 NUAK2Q9H093 628 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 SLC25A18Q9H1K4 315 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 SRA1Q9HD15 236 aaKnown RBP10.05□□□□□ -0.8
VMP1-207ENST00000588131 H2AFY2Q9P0M6 372 aaPredicted RBP10.05□□□□□ -0.8
VMP1-207ENST00000588131 BLOC1S6Q9UL45 172 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 MCTS1Q9ULC4 181 aaKnown RBP10.05□□□□□ -0.8
VMP1-207ENST00000588131 RPL36Q9Y3U8 105 aaKnown RBP10.05□□□□□ -0.8
VMP1-207ENST00000588131 FLVCR1Q9Y5Y0 555 aa10.05□□□□□ -0.8
VMP1-207ENST00000588131 IGKV3D-15A0A087WSY6 115 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 IGKV1D-43A0A0B4J1Z2 117 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 OR14I1A6ND48 311 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 SLC22A20A6NK97 555 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 SLC22A31A6NKX4 558 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 ZNF726A6NNF4 738 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 GPANK1O95872 356 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 MT-ND2P03891 347 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 CDK1P06493 297 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 STSP08842 583 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 PIPP12273 146 aaPredicted RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 ATP6V1B1P15313 513 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 CTLA4P16410 223 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 GSTT1P30711 240 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 MTNR1AP48039 350 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 SELENOPP49908 381 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 RPS7P62081 194 aaKnown RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 LY6DQ14210 128 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 ETFDHQ16134 617 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 KRTCAP3Q53RY4 240 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 PHYHD1Q5SRE7 291 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 LINC01590Q5TEZ4 76 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 GTF2IRD2BQ6EKJ0 949 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 TMEM154Q6P9G4 183 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 LYPD4Q6UWN0 246 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 B3GNT6Q6ZMB0 384 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 GTF2IRD2Q86UP8 949 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 TMEM123Q8N131 208 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 NOXO1Q8NFA2 376 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 OR4F15Q8NGB8 312 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 OR52I1Q8NGK6 324 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 IPCEF1Q8WWN9 437 aaPredicted RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 RFKQ969G6 155 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 NMD3Q96D46 503 aaKnown RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 ZMYND19Q96E35 227 aaPredicted RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 SLC25A44Q96H78 314 aaPredicted RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 ADAD1Q96M93 576 aaKnown RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 CNTNAP3BQ96NU0 1288 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 OR2M2Q96R28 347 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 SIGLEC11Q96RL6 698 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 TRIB1Q96RU8 372 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 TEAD3Q99594 435 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 SLX1AQ9BQ83 275 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 COPS4Q9BT78 406 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 ALG12Q9BV10 488 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 MRPL13Q9BYD1 178 aaKnown RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 CNTNAP3Q9BZ76 1288 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 PRRG4Q9BZD6 226 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 RERGLQ9H628 205 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 ASF1BQ9NVP2 202 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 MRPS18AQ9NVS2 196 aaKnown RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 TAS2R16Q9NYV7 291 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 CNOT2Q9NZN8 540 aaKnown RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 CLCF1Q9UBD9 225 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.04□□□□□ -0.8
VMP1-207ENST00000588131 CLEC4AQ9UMR7 237 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 B9D1Q9UPM9 204 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 ZNF175Q9Y473 711 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 ANKRD11Q6UB99 2663 aaPredicted RBP10.04□□□□□ -0.8
VMP1-207ENST00000588131 CHD8Q9HCK8 2581 aa10.04□□□□□ -0.8
VMP1-207ENST00000588131 BSNQ9UPA5 3926 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 IGLV1-36A0A0B4J1U3 117 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 EFCAB10A6NFE3 127 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 TRIM64CA6NLI5 447 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 SNTNA6NMZ2 147 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 ERVH48-1M5A8F1 160 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 RGS10O43665 173 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 SLC16A7O60669 478 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 ZNF432O94892 652 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 GLCEO94923 617 aa10.03□□□□□ -0.8
VMP1-207ENST00000588131 IGHG1P01857 330 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms