RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 ACVR1BP36896 505 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 AQP2P41181 271 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 TRAM2Q15035 370 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 HSH2DQ96JZ2 352 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 FOXB1Q99853 325 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 SEC61A2Q9H9S3 476 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 INIPQ9NRY2 104 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 ABCD2Q9UBJ2 740 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 ARL2BPQ9Y2Y0 163 aa17.76■□□□□ 0.43
SS18-224ENST00000584083 MCIDASD6RGH6 385 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 J3KTA2 159 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 SSX4O60224 188 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 GMNNO75496 209 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 IFI30P13284 250 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 CLRN1P58418 232 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 PIGFQ07326 219 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 RAB35Q15286 201 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 VHLLQ6RSH7 139 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 OFCC1Q8IZS5 231 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 NANOS1Q8WY41 292 aaKnown RBP17.75■□□□□ 0.43
SS18-224ENST00000584083 BPIFA2Q96DR5 249 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 FBXO17Q96EF6 278 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 EGFL7Q9UHF1 273 aa17.75■□□□□ 0.43
SS18-224ENST00000584083 ARFGEF3Q5TH69 2177 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 HTR3EA5X5Y0 456 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 LY6G6DO95868 133 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 IGHG1P01857 330 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 CALCRP30988 508 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 NUDT6P53370 316 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 LAPTM4AQ15012 233 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 GSG1Q2KHT4 349 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 LRFN4Q6PJG9 635 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 ZNF627Q7L945 461 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 MYPOPQ86VE0 399 aaPredicted RBP17.74■□□□□ 0.43
SS18-224ENST00000584083 RNF148Q8N7C7 305 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 OR4F15Q8NGB8 312 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 MOSPD2Q8NHP6 518 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 LIPHQ8WWY8 451 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 LRRC37BQ96QE4 947 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 CA10Q9NS85 328 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 B3GNT2Q9NY97 397 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 RPS6KA6Q9UK32 745 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 PMF1-BGLAPU3KQ54 211 aa17.74■□□□□ 0.43
SS18-224ENST00000584083 FFAR1O14842 300 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 QDPRP09417 244 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 PGA4P0DJD7 388 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 PGA3P0DJD8 388 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 SAGP10523 405 aaPredicted RBP17.73■□□□□ 0.43
SS18-224ENST00000584083 FUT4P22083 530 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 SERPINF1P36955 418 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 DAP3P51398 398 aaKnown RBP17.73■□□□□ 0.43
SS18-224ENST00000584083 LSM11P83369 360 aaKnown RBP eCLIP17.73■□□□□ 0.43
SS18-224ENST00000584083 GLYATQ6IB77 296 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 PIWIL3Q7Z3Z3 882 aaKnown RBP17.73■□□□□ 0.43
SS18-224ENST00000584083 HDDC2Q7Z4H3 204 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 PIGWQ7Z7B1 504 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 CYP4Z1Q86W10 505 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 MEX3DQ86XN8 651 aaKnown RBP17.73■□□□□ 0.43
SS18-224ENST00000584083 NRMQ8IXM6 262 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 SYT14Q8NB59 555 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 IL17RDQ8NFM7 739 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 ASB10Q8WXI3 467 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 HTRA1Q92743 480 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 MAN2C1Q9NTJ4 1040 aa17.73■□□□□ 0.43
SS18-224ENST00000584083 RNF223E7ERA6 249 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 DHHO43323 396 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 ENTPD5O75356 428 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 DCTN3O75935 186 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 HEXAP06865 529 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 ACADSP16219 412 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 PTDSS1P48651 473 aaKnown RBP17.72■□□□□ 0.43
SS18-224ENST00000584083 MYBPC1Q00872 1141 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 HGFACQ04756 655 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 RUNX1T1Q06455 604 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 ZNF730Q6ZMV8 503 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 RBM15BQ8NDT2 890 aaKnown RBP17.72■□□□□ 0.43
SS18-224ENST00000584083 ACOT11Q8WXI4 607 aaPredicted RBP17.72■□□□□ 0.43
SS18-224ENST00000584083 ZNF347Q96SE7 839 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 NOX3Q9HBY0 568 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 TAGLN3Q9UI15 199 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 ENPP4Q9Y6X5 453 aa17.72■□□□□ 0.43
SS18-224ENST00000584083 IGHV2OR16-5A0A0B4J2B6 119 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 VSTM5A8MXK1 200 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 H7C417 338 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 TRMUO75648 421 aaKnown RBP17.71■□□□□ 0.43
SS18-224ENST00000584083 UBL3O95164 117 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 RAB36O95755 333 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 OR4A8P0C604 315 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 OR8G3PP0DMU2 310 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 TCN1P20061 433 aaPredicted RBP17.71■□□□□ 0.43
SS18-224ENST00000584083 MAKP20794 623 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 ZNF84P51523 738 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 SNRPD2P62316 118 aaKnown RBP17.71■□□□□ 0.43
SS18-224ENST00000584083 RAB1AP62820 205 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 ALG10Q5BKT4 473 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 RRM2BQ7LG56 351 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 SKA3Q8IX90 412 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 CDK20Q8IZL9 346 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 SLC22A24Q8N4F4 322 aa17.71■□□□□ 0.43
SS18-224ENST00000584083 FAM156AQ8NDB6 213 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms