RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.44□□□□□ -1.06
RFFL-210ENST00000582308 DBPQ10586 325 aaPredicted RBP8.44□□□□□ -1.06
RFFL-210ENST00000582308 SNAPC1Q16533 368 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 PHYHD1Q5SRE7 291 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 RIPPLY2Q5TAB7 128 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 TTC23Q5W5X9 447 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 FAM205BPQ63HN1 556 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 TMEM211Q6ICI0 200 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 NIPAL3Q6P499 406 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 VWA1Q6PCB0 445 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 CASP12Q6UXS9 341 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.44□□□□□ -1.06
RFFL-210ENST00000582308 BTLAQ7Z6A9 289 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 C20orf196Q8IYI0 205 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 TCEANCQ8N8B7 351 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 CNEP1R1Q8N9A8 125 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 SYT14Q8NB59 555 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 CYB561A3Q8NBI2 242 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 SLC37A3Q8NCC5 494 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 NPEPL1Q8NDH3 523 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 ZNF555Q8NEP9 628 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 OR52E2Q8NGJ4 325 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 PRR7Q8TB68 274 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 TMEM54Q969K7 222 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 NMD3Q96D46 503 aaKnown RBP8.44□□□□□ -1.06
RFFL-210ENST00000582308 STARD4Q96DR4 205 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 SLC25A44Q96H78 314 aaPredicted RBP8.44□□□□□ -1.06
RFFL-210ENST00000582308 ADAD1Q96M93 576 aaKnown RBP8.44□□□□□ -1.06
RFFL-210ENST00000582308 KCNK17Q96T54 332 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 NMNAT3Q96T66 252 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 ZNF184Q99676 751 aaPredicted RBP8.44□□□□□ -1.06
RFFL-210ENST00000582308 C12orf49Q9H741 205 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 CMC2Q9NRP2 79 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 PARPBPQ9NWS1 579 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 ZNF226Q9NYT6 803 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 Q9UFV3 132 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 KLHL21Q9UJP4 597 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 GMPPBQ9Y5P6 360 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 FLNCQ14315 2725 aa8.44□□□□□ -1.06
RFFL-210ENST00000582308 MYO18BQ8IUG5 2567 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 SLC22A23A1A5C7 686 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 RIIAD1A6NNX1 92 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 XKRYO14609 159 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 SLC43A1O75387 559 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 MRPL33O75394 65 aaKnown RBP8.43□□□□□ -1.06
RFFL-210ENST00000582308 CGAP01215 116 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 IFNGP01579 166 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 IGHG1P01857 330 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 CTSSP25774 331 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 OR3A2P47893 321 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 HSPA13P48723 471 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 PCYT1AP49585 367 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 ITGADQ13349 1161 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 KEAP1Q14145 624 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 CRMP1Q14194 572 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 HIST3H3Q16695 136 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 ZNF691Q5VV52 312 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 LEG1Q6P5S2 330 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 LRFN4Q6PJG9 635 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 USP51Q70EK9 711 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 LINGO2Q7L985 606 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 HDDC2Q7Z4H3 204 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 ADCK1Q86TW2 530 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 FJX1Q86VR8 437 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 ATCAYQ86WG3 371 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 LIX1LQ8IVB5 337 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 ZNF100Q8IYN0 542 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 SDR9C7Q8NEX9 313 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 OR6K3Q8NGY3 331 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 FAM81AQ8TBF8 368 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 RND1Q92730 232 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 ZNF566Q969W8 418 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 LRR1Q96L50 414 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 MUS81Q96NY9 551 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 SLC38A2Q96QD8 506 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 SNX18Q96RF0 628 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 IL4I1Q96RQ9 567 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 ALG12Q9BV10 488 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 TEX12Q9BXU0 123 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 NMNAT2Q9BZQ4 307 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 FN3KQ9H479 309 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 MED20Q9H944 212 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 HINT3Q9NQE9 182 aaKnown RBP8.43□□□□□ -1.06
RFFL-210ENST00000582308 IMPAD1Q9NX62 359 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 VSX1Q9NZR4 365 aaPredicted RBP8.43□□□□□ -1.06
RFFL-210ENST00000582308 AASSQ9UDR5 926 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 FOXD3Q9UJU5 478 aaPredicted RBP8.43□□□□□ -1.06
RFFL-210ENST00000582308 GPR52Q9Y2T5 361 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 EMC9Q9Y3B6 208 aa8.43□□□□□ -1.06
RFFL-210ENST00000582308 HCFC1P51610 2035 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 IGKV1D-43A0A0B4J1Z2 117 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 A0A1B0GUH1 482 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 FAM183AA6NL82 134 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 HSPB2A8KAH6 182 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 CENPBD1B2RD01 187 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 M0R3G1 203 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 DCTN6O00399 190 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 LRRTM2O43300 516 aa8.42□□□□□ -1.06
RFFL-210ENST00000582308 TLX2O43763 284 aaPredicted RBP8.42□□□□□ -1.06
RFFL-210ENST00000582308 AKAP8O43823 692 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms