RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 GP6Q9HCN6 339 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 HINT3Q9NQE9 182 aaKnown RBP6.32□□□□□ -1.4
DDX42-213ENST00000581477 RASSF1Q9NS23 344 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 CLN6Q9NWW5 311 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 VSX1Q9NZR4 365 aaPredicted RBP6.32□□□□□ -1.4
DDX42-213ENST00000581477 LUZP4Q9P127 313 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 KLHL13Q9P2N7 655 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 CLCF1Q9UBD9 225 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 TNFRSF10DQ9UBN6 386 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 ING1Q9UK53 422 aaPredicted RBP6.32□□□□□ -1.4
DDX42-213ENST00000581477 MCTS1Q9ULC4 181 aaKnown RBP6.32□□□□□ -1.4
DDX42-213ENST00000581477 GTF3C1Q12789 2109 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 FREM2Q5SZK8 3169 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 PKD1L2Q7Z442 2459 aa6.32□□□□□ -1.4
DDX42-213ENST00000581477 ALPK2Q86TB3 2170 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 MAP1BP46821 2468 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 IGHV3-15A0A0B4J1V0 119 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 PRSS37A4D1T9 235 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 OR6C68A6NDL8 312 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 CLCA1A8K7I4 914 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 ZNF724A8MTY0 619 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 PRR23D1E9PI22 279 aaPredicted RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 NPIPA2E9PIF3 369 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 NPIPA3F8WFD2 350 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 M0R129 80 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 M0R3G1 203 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 GPR171O14626 319 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 AQP8O94778 261 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 ZNF432O94892 652 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 SYNGR4O95473 234 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 PLGP00747 810 aaPredicted RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 HOXD4P09016 255 aaPredicted RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 PRR23D2P0DMB1 279 aaPredicted RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 FCGR2AP12318 317 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 GABRA1P14867 456 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 ZNF3P17036 446 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 PAICSP22234 425 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 SLC2A5P22732 501 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 CRHBPP24387 322 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 NTF4P34130 210 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 PTGS2P35354 604 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 PTGER4P35408 488 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 ACVR1BP36896 505 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 SLC15A1P46059 708 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 CHN2P52757 468 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 SLC25A1P53007 311 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 RASGEF1BQ0VAM2 473 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 TMED1Q13445 227 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 TOP3AQ13472 1001 aaPredicted RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 KRR1Q13601 381 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 C1DQ13901 141 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 CRMP1Q14194 572 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 LY6DQ14210 128 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 PON3Q15166 354 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 RNPS1Q15287 305 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 C3AR1Q16581 482 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 MESTQ5EB52 335 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 GTF2IRD2BQ6EKJ0 949 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 CHMP1BQ7LBR1 199 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 CXXC5Q7LFL8 322 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 GPAT4Q86UL3 456 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 GTF2IRD2Q86UP8 949 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 TMEM123Q8N131 208 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 LSM14AQ8ND56 463 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 OR9K2Q8NGE7 335 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 FNDC9Q8TBE3 224 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 TMEM45BQ96B21 275 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 RASD2Q96D21 266 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 NMD3Q96D46 503 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 SLC25A44Q96H78 314 aaPredicted RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 LRR1Q96L50 414 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 ZNF582Q96NG8 517 aaPredicted RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 NMNAT3Q96T66 252 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 GLRX2Q9NS18 164 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 ASF1BQ9NVP2 202 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 MRPS18AQ9NVS2 196 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 FKBP14Q9NWM8 211 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 MED29Q9NX70 200 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 KLHL9Q9P2J3 617 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 AASSQ9UDR5 926 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 CAMK2AQ9UQM7 478 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 RCE1Q9Y256 329 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 ZNF835Q9Y2P0 537 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 GPR52Q9Y2T5 361 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 FLVCR1Q9Y5Y0 555 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 FRYQ5TBA9 3013 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 TLN1Q9Y490 2541 aaKnown RBP6.31□□□□□ -1.4
DDX42-213ENST00000581477 DMXL2Q8TDJ6 3036 aa6.31□□□□□ -1.4
DDX42-213ENST00000581477 SLC22A23A1A5C7 686 aa6.3□□□□□ -1.4
DDX42-213ENST00000581477 MBD3L4A6NDZ8 208 aaPredicted RBP6.3□□□□□ -1.4
DDX42-213ENST00000581477 MBD3L3A6NE82 208 aaPredicted RBP6.3□□□□□ -1.4
DDX42-213ENST00000581477 MBD3L5A6NJ08 208 aaPredicted RBP6.3□□□□□ -1.4
DDX42-213ENST00000581477 CD8B2A6NJW9 211 aa6.3□□□□□ -1.4
DDX42-213ENST00000581477 SLC22A20A6NK97 555 aa6.3□□□□□ -1.4
DDX42-213ENST00000581477 FAM183AA6NL82 134 aa6.3□□□□□ -1.4
DDX42-213ENST00000581477 SNTNA6NMZ2 147 aa6.3□□□□□ -1.4
DDX42-213ENST00000581477 SLC1A7O00341 560 aa6.3□□□□□ -1.4
DDX42-213ENST00000581477 PRODHO43272 600 aa6.3□□□□□ -1.4
DDX42-213ENST00000581477 ARHGEF9O43307 516 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms