RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 MS4A18Q3C1V0 323 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 CREB3L2Q70SY1 520 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 NUFIP2Q7Z417 695 aaKnown RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 LUZP2Q86TE4 346 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 ZNF100Q8IYN0 542 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 KDM8Q8N371 416 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 ANKK1Q8NFD2 765 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 OR8J1Q8NGP2 316 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 OR51A7Q8NH64 312 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 APH1AQ96BI3 265 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 ZNF775Q96BV0 537 aaPredicted RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 POLDIP3Q9BY77 421 aaKnown RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 OPN3Q9H1Y3 402 aaPredicted RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 EGLN3Q9H6Z9 239 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 NRIP3Q9NQ35 241 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 IMPAD1Q9NX62 359 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 FOXD3Q9UJU5 478 aaPredicted RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 RCE1Q9Y256 329 aa13.75□□□□□ -0.21
SS18-216ENST00000580751 UTP20O75691 2785 aaKnown RBP13.75□□□□□ -0.21
SS18-216ENST00000580751 A8MXE2 369 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 BLOC1S5-TXNDC5H3BN57 136 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 BHLHE40O14503 412 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 RNF13O43567 381 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 TRAF3IP2O43734 574 aaPredicted RBP13.74□□□□□ -0.21
SS18-216ENST00000580751 OR3A2P47893 321 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 RPL18Q07020 188 aaKnown RBP13.74□□□□□ -0.21
SS18-216ENST00000580751 TOP3AQ13472 1001 aaPredicted RBP13.74□□□□□ -0.21
SS18-216ENST00000580751 PGGHGQ32M88 737 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 ALG10Q5BKT4 473 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 MEDAGQ5VYS4 303 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 GPR139Q6DWJ6 353 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 TFAP2EQ6VUC0 442 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 BEND4Q6ZU67 534 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 AAED1Q7RTV5 226 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 ZIC4Q8N9L1 334 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 RHOXF1Q8NHV9 184 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 SAMD8Q96LT4 415 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 CNBD2Q96M20 576 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 Q96MT0 163 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 ZNF385AQ96PM9 386 aaKnown RBP13.74□□□□□ -0.21
SS18-216ENST00000580751 FN3KQ9H479 309 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 TAS2R5Q9NYW4 299 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 ICE1Q9Y2F5 2266 aa13.74□□□□□ -0.21
SS18-216ENST00000580751 HECTD1Q9ULT8 2610 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 TRAV27A0A087WT01 109 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 SH3D21A4FU49 640 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 OR6C65A6NJZ3 312 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 C11orf98E9PRG8 122 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 CNOT4O95628 575 aaKnown RBP13.73□□□□□ -0.21
SS18-216ENST00000580751 TXNDC12O95881 172 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 IFNGP01579 166 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 CD14P08571 375 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 GNAO1P09471 354 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 PCYT1AP49585 367 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 FXYD6P3P58550 94 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 EFNB1P98172 346 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 TFF3Q07654 80 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 FAM205BPQ63HN1 556 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 MEX3DQ86XN8 651 aaKnown RBP13.73□□□□□ -0.21
SS18-216ENST00000580751 ZNF610Q8N9Z0 462 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 LRRC75AQ8NAA5 344 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 OR8D4Q8NGM9 314 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 FAM81AQ8TBF8 368 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 RNASE6Q93091 150 aaKnown RBP13.73□□□□□ -0.21
SS18-216ENST00000580751 RBM24Q9BX46 236 aaKnown RBP13.73□□□□□ -0.21
SS18-216ENST00000580751 PLA2G12AQ9BZM1 189 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 ELOVL5Q9NYP7 299 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 ADGRG4Q8IZF6 3080 aa13.73□□□□□ -0.21
SS18-216ENST00000580751 A0A1W2PRG6 482 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 A1L4Q6 167 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 SNTNA6NMZ2 147 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 PRSS44E7EML9 344 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 SERPINI2O75830 405 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 IGHMP01871 453 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 CCDC159P0C7I6 412 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 HLA-DOBP13765 273 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 RPL4P36578 427 aaKnown RBP13.72□□□□□ -0.21
SS18-216ENST00000580751 AQP2P41181 271 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 CHN2P52757 468 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 CLDN17P56750 224 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 MYBPC1Q00872 1141 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 IL5RAQ01344 420 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 MAD2L1BPQ15013 274 aaPredicted RBP13.72□□□□□ -0.21
SS18-216ENST00000580751 RBM48Q5RL73 367 aaKnown RBP13.72□□□□□ -0.21
SS18-216ENST00000580751 ZNF474Q6S9Z5 364 aaPredicted RBP13.72□□□□□ -0.21
SS18-216ENST00000580751 THSD4Q6ZMP0 1018 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 PTCHD4Q6ZW05 846 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 HDDC2Q7Z4H3 204 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 HDAC2Q92769 488 aaKnown RBP13.72□□□□□ -0.21
SS18-216ENST00000580751 PSMG3-AS1Q96PY0 264 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 SNX18Q96RF0 628 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 IFT27Q9BW83 186 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 SLCO5A1Q9H2Y9 848 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 CMC2Q9NRP2 79 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 INIPQ9NRY2 104 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 GALNT8Q9NY28 637 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 KLHL21Q9UJP4 597 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 BLOC1S6Q9UL45 172 aa13.72□□□□□ -0.21
SS18-216ENST00000580751 SURF4O15260 269 aa13.71□□□□□ -0.21
SS18-216ENST00000580751 AHCYL1O43865 530 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms