RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 MYO7BQ6PIF6 2116 aa9.88□□□□□ -0.83
CDK5RAP3-204ENST00000577664 IGHV3-15A0A0B4J1V0 119 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 A0A1W2PRG6 482 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 OR6C65A6NJZ3 312 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 H3BN98 237 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ZNHIT1O43257 154 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TOXO94900 526 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 CNOT4O95628 575 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 IL18BPO95998 194 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 F13BP05160 661 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 IGFBP1P08833 259 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 AHCYP23526 432 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 DAP3P51398 398 aaKnown RBP9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 IL18R1Q13478 541 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 GINS1Q14691 196 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 STK11Q15831 433 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ACKR1Q16570 336 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 PGGHGQ32M88 737 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 RIPPLY2Q5TAB7 128 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TMEM211Q6ICI0 200 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 RPTNQ6XPR3 784 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 B3GNT6Q6ZMB0 384 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 SLC35D2Q76EJ3 337 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 FAM214BQ7L5A3 538 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 HDDC2Q7Z4H3 204 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 FJX1Q86VR8 437 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 KDM8Q8N371 416 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 DHRSXQ8N5I4 330 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 OR4Q3Q8NH05 313 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TEX47Q8TBZ9 253 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 FNDC8Q8TC99 324 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ABHD3Q8WU67 409 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ASB10Q8WXI3 467 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 DNAJA3Q96EY1 480 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 SLC25A44Q96H78 314 aaPredicted RBP9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TRIB1Q96RU8 372 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 KATNB1Q9BVA0 655 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 CMC2Q9NRP2 79 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 PLSCR4Q9NRQ2 329 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 PARPBPQ9NWS1 579 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 EMC3Q9P0I2 261 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 LRRC42Q9Y546 428 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 HSPE1-MOB4S4R3N1 261 aa9.87□□□□□ -0.83
CDK5RAP3-204ENST00000577664 FLNAP21333 2647 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ABCA4P78363 2273 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 A6NIZ1 184 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 KDM4EB2RXH2 506 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 SURF4O15260 269 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 SOX14O95416 240 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 BCL10O95999 233 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 GLI4P10075 376 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 IFNGR1P15260 489 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 GGT2P36268 569 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 RPL4P36578 427 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 CAPGP40121 348 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 KIR2DL2P43627 348 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 PCYT1AP49585 367 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 AQP4P55087 323 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 RAP1BP61224 184 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 RAP1AP62834 184 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 MYBPC1Q00872 1141 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 POU3F1Q03052 451 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ADCK1Q86TW2 530 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 CCDC71Q8IV32 467 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TUSC5Q8IXB3 177 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TMEM123Q8N131 208 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ZNF808Q8N4W9 903 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 NPEPL1Q8NDH3 523 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 FBLIM1Q8WUP2 373 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 PHF3Q92576 2039 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 NMD3Q96D46 503 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 BOD1Q96IK1 185 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TXNDC15Q96J42 360 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ERMAPQ96PL5 475 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ZNF385AQ96PM9 386 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TSPAN32Q96QS1 320 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 KCNK17Q96T54 332 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ZNF184Q99676 751 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ADI1Q9BV57 179 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 IFT27Q9BW83 186 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TEX12Q9BXU0 123 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 POLDIP3Q9BY77 421 aaKnown RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 PRRG4Q9BZD6 226 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 LINC00470Q9BZP3 86 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 FN3KQ9H479 309 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 TBC1D23Q9NUY8 699 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 VSX1Q9NZR4 365 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 GRHPRQ9UBQ7 328 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ZNF629Q9UEG4 869 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 KLHL21Q9UJP4 597 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 FOXD3Q9UJU5 478 aaPredicted RBP9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 RAB26Q9ULW5 256 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 MEMO1Q9Y316 297 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ADAM18Q9Y3Q7 739 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 IER3IP1Q9Y5U9 82 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ARHGAP21Q5T5U3 1957 aa9.86□□□□□ -0.83
CDK5RAP3-204ENST00000577664 ALPK2Q86TB3 2170 aa9.85□□□□□ -0.83
CDK5RAP3-204ENST00000577664 MED12LQ86YW9 2145 aa9.85□□□□□ -0.83
CDK5RAP3-204ENST00000577664 SLC35F4A4IF30 521 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms