RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 SF3A2Q15428 464 aaKnown RBP1.19□□□□□ -2.22
TOP2A-202ENST00000577541 GUCA2BQ16661 112 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 DGUOKQ16854 277 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 TPD52L1Q16890 204 aaPredicted RBP1.19□□□□□ -2.22
TOP2A-202ENST00000577541 MICBQ29980 383 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 KLHL38Q2WGJ6 581 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 DEFB116Q30KQ4 102 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 PARP15Q460N3 678 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 PIGGQ5H8A4 983 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 SOHLH1Q5JUK2 328 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 CTSL3PQ5NE16 218 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 MARCH8Q5T0T0 291 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 TIGD3Q6B0B8 471 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 DNAJC24Q6P3W2 148 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 SASS6Q6UVJ0 657 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 C6orf89Q6UWU4 347 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 Q6ZN92 141 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF621Q6ZSS3 439 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF571Q7Z3V5 609 aaPredicted RBP1.19□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF546Q86UE3 836 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 MS4A15Q8N5U1 240 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF615Q8N8J6 731 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 OR10G3Q8NGC4 313 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 OR6C4Q8NGE1 309 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 OR1S2Q8NGQ3 325 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 UBALD1Q8TB05 177 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 PLPPR1Q8TBJ4 325 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 FANK1Q8TC84 345 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 MAIP1Q8WWC4 291 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 NDRG1Q92597 394 aaKnown RBP1.19□□□□□ -2.22
TOP2A-202ENST00000577541 MRPS31Q92665 395 aaKnown RBP1.19□□□□□ -2.22
TOP2A-202ENST00000577541 CXorf40BQ96DE9 158 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 MED8Q96G25 268 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 PLEKHA8Q96JA3 519 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF641Q96N77 438 aaPredicted RBP1.19□□□□□ -2.22
TOP2A-202ENST00000577541 RPRD1AQ96P16 312 aaPredicted RBP1.19□□□□□ -2.22
TOP2A-202ENST00000577541 COL21A1Q96P44 957 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 CLCC1Q96S66 551 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 SORT1Q99523 831 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 HIST1H4GQ99525 98 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 RARRES2Q99969 163 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 P2RY13Q9BPV8 354 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 TMEM59Q9BXS4 323 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 PLA2G12AQ9BZM1 189 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 DEFB127Q9H1M4 99 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 OR51M1Q9H341 326 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 PLGRKTQ9HBL7 147 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 TM9SF3Q9HD45 589 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 SLCO1B3Q9NPD5 702 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 ADAP2Q9NPF8 381 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 ETNK2Q9NVF9 386 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 GIN1Q9NXP7 522 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 CALYQ9NYX4 217 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 RPL36Q9Y3U8 105 aaKnown RBP1.19□□□□□ -2.22
TOP2A-202ENST00000577541 MSH6P52701 1360 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 CEMIPQ8WUJ3 1361 aa1.19□□□□□ -2.22
TOP2A-202ENST00000577541 PHF3Q92576 2039 aaKnown RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 CDHR2Q9BYE9 1310 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 SYNJ2BP-COX16A0A087WUM0 186 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 GOLGA8OA6NCC3 632 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 LOC110117498-PIK3R3F6TDL0 507 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 GOLGA8NF8WBI6 632 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 CD5LO43866 347 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 ERLIN1O75477 346 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 CLDN9O95484 217 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 KLK3P07288 261 aaPredicted RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 CRYGBP07316 175 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 MRPL3P09001 348 aaKnown RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 ABOP16442 354 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 MX1P20591 662 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 FMO3P31513 532 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 YWHABP31946 246 aaKnown RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 RPS9P46781 194 aaKnown RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 PRMT2P55345 433 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 TAS2R19P59542 299 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 GPX6P59796 221 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 ACTA1P68133 377 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 CCNA1P78396 465 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 SCRN3Q0VDG4 424 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 ILKQ13418 452 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 NRF1Q16656 503 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 LRRC23Q53EV4 343 aaPredicted RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 LINC00483Q53H64 154 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 HSP90AB3PQ58FF7 597 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 VAX1Q5SQQ9 334 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 PRAMEF5Q5TYX0 476 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 PRAMEF6Q5VXH4 476 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 RNASEKQ6P5S7 137 aaKnown RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 TRIM40Q6P9F5 258 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 CNIH2Q6PI25 160 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 HSDL2Q6YN16 418 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 NCCRP1Q6ZVX7 275 aaPredicted RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 GDPD3Q7L5L3 318 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 H2BFWTQ7Z2G1 175 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 LHFPL3Q86UP9 236 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 EGFL6Q8IUX8 553 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 FAM83FQ8NEG4 500 aaPredicted RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 OR10G2Q8NGC3 310 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 OR9K2Q8NGE7 335 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 OR56B2PQ8NGI1 322 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms