RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 PTH2RP49190 550 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 CDH11P55287 796 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 NKX6-1P78426 367 aaPredicted RBP7.54□□□□□ -1.2
SMG6-216ENST00000575176 FMODQ06828 376 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 MST1LQ2TV78 715 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 C3orf36Q3SXR2 165 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 SPATS1Q496A3 300 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 SAMD4BQ5PRF9 694 aaKnown RBP7.54□□□□□ -1.2
SMG6-216ENST00000575176 C10orf128Q5T292 105 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 GKAP1Q5VSY0 366 aaPredicted RBP7.54□□□□□ -1.2
SMG6-216ENST00000575176 CARD17Q5XLA6 110 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 LCN8Q6JVE9 175 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 PODNL1Q6PEZ8 512 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 KLHL24Q6TFL4 600 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 THSD4Q6ZMP0 1018 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 FOXL2NBQ6ZUU3 175 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 TMPRSS11FQ6ZWK6 438 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 SSX8Q7RTT4 187 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 FAM169BQ8N8A8 192 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 CCDC197Q8NCU1 140 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 RNF217Q8TC41 542 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 FBXW5Q969U6 566 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 FAM162AQ96A26 154 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 SLC25A44Q96H78 314 aaPredicted RBP7.54□□□□□ -1.2
SMG6-216ENST00000575176 CLPTM1LQ96KA5 538 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 ZNF347Q96SE7 839 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 GPX7Q96SL4 187 aaPredicted RBP7.54□□□□□ -1.2
SMG6-216ENST00000575176 CCL19Q99731 98 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 GRIP2Q9C0E4 1043 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 ESRP2Q9H6T0 727 aaKnown RBP7.54□□□□□ -1.2
SMG6-216ENST00000575176 OBP2BQ9NPH6 170 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 TAS2R1Q9NYW7 299 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 ADA2Q9NZK5 511 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 UPB1Q9UBR1 384 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 SIGLEC7Q9Y286 467 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 MED31Q9Y3C7 131 aa7.54□□□□□ -1.2
SMG6-216ENST00000575176 CIB4A0PJX0 185 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 SH3PXD2BA1X283 911 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 CENPBD1B2RD01 187 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 IMPA2O14732 288 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 NDUFS7O75251 213 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 PTP4A3O75365 173 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 TRMUO75648 421 aaKnown RBP7.53□□□□□ -1.2
SMG6-216ENST00000575176 SERPINI2O75830 405 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 PDE5AO76074 875 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 UBOX5O94941 541 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 IGHV4-39P01824 125 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 HLA-HP01893 362 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 MMP7P09237 267 aaPredicted RBP7.53□□□□□ -1.2
SMG6-216ENST00000575176 IFI30P13284 250 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 CALB2P22676 271 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 PTAFRP25105 342 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 NAAAQ02083 359 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 HGFACQ04756 655 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 KEAP1Q14145 624 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 LAPTM4AQ15012 233 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 TRAM2Q15035 370 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 MESTQ5EB52 335 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 TMEM255AQ5JRV8 349 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 Q5PR19 223 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 ZNF770Q6IQ21 691 aaPredicted RBP7.53□□□□□ -1.2
SMG6-216ENST00000575176 ALKBH2Q6NS38 261 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 PGM2L1Q6PCE3 622 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 PIWIL3Q7Z3Z3 882 aaKnown RBP7.53□□□□□ -1.2
SMG6-216ENST00000575176 MDP1Q86V88 176 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 IGFN1Q86VF2 1251 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 CIARTQ8N365 385 aaPredicted RBP7.53□□□□□ -1.2
SMG6-216ENST00000575176 OR4C15Q8NGM1 316 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 LZICQ8WZA0 190 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 MS4A3Q96HJ5 214 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 ADAD1Q96M93 576 aaKnown RBP7.53□□□□□ -1.2
SMG6-216ENST00000575176 HS6ST2Q96MM7 605 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 SLC38A2Q96QD8 506 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 FOXB1Q99853 325 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 C1QTNF6Q9BXI9 259 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 C1orf21Q9H246 121 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 TMEM38BQ9NVV0 291 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 GLTPQ9NZD2 209 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 SELENONQ9NZV5 590 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 ACTR3BQ9P1U1 418 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 RPS6KA6Q9UK32 745 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 SAMD4AQ9UPU9 718 aaKnown RBP7.53□□□□□ -1.2
SMG6-216ENST00000575176 ADAM18Q9Y3Q7 739 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 V9GYQ6 96 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 CSPG4Q6UVK1 2322 aa7.53□□□□□ -1.2
SMG6-216ENST00000575176 SONP18583 2426 aaKnown RBP7.53□□□□□ -1.2
SMG6-216ENST00000575176 IGHV2OR16-5A0A0B4J2B6 119 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 HTR3EA5X5Y0 456 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 B2RBV5 119 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 BLOC1S5-TXNDC5H3BN57 136 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 M0R1B8 84 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 RNF13O43567 381 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 AKAP8O43823 692 aaKnown RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 MGRN1O60291 552 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 TMCC2O75069 709 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 SLC2A10O95528 541 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 TP53P04637 393 aaPredicted RBP7.52□□□□□ -1.21
SMG6-216ENST00000575176 SCG5P05408 212 aa7.52□□□□□ -1.21
SMG6-216ENST00000575176 H1F0P07305 194 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms