RNA–Protein interactions for RNA: ENST00000574763.5

LITAF-215, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LITAF, Length 717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-215ENST00000574763 FXYD1O00168 92 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 RNF13O43567 381 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 SASH3O75995 380 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 RAB36O95755 333 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 ERCC1P07992 297 aaPredicted RBP14.96□□□□□ -0.01
LITAF-215ENST00000574763 APEHP13798 732 aaKnown RBP14.96□□□□□ -0.01
LITAF-215ENST00000574763 NR4A1P22736 598 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 GIPRP48546 466 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 PTDSS1P48651 473 aaKnown RBP14.96□□□□□ -0.01
LITAF-215ENST00000574763 RAB1AP62820 205 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.96□□□□□ -0.012e-6■■□□□ 13.8
LITAF-215ENST00000574763 SPATA3Q8NHX4 192 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 NEU4Q8WWR8 484 aaPredicted RBP14.96□□□□□ -0.01
LITAF-215ENST00000574763 BEX2Q9BXY8 128 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 BPESC1Q9GZL8 116 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 DENND2DQ9H6A0 471 aaPredicted RBP14.96□□□□□ -0.01
LITAF-215ENST00000574763 DYNLRB1Q9NP97 96 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 GLTPQ9NZD2 209 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 CMAHPQ9Y471 501 aa14.96□□□□□ -0.01
LITAF-215ENST00000574763 CUBNO60494 3623 aa14.96□□□□□ -0.02
LITAF-215ENST00000574763 LMX1BO60663 402 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 UBL3O95164 117 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 STAMBPO95630 424 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 HIST1H2ABP04908 130 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 IGFBP1P08833 259 aaPredicted RBP14.95□□□□□ -0.02
LITAF-215ENST00000574763 ASAH2BP0C7U1 165 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 UMPSP11172 480 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 ZNF35P13682 527 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 DAOP14920 347 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 MELKQ14680 651 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 MSMPQ1L6U9 139 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 IQCCQ4KMZ1 466 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 HIST3H2AQ7L7L0 130 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 PIWIL3Q7Z3Z3 882 aaKnown RBP14.95□□□□□ -0.02
LITAF-215ENST00000574763 NANOGNBQ7Z5D8 188 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 CARM1Q86X55 608 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 CALHM3Q86XJ0 350 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 SKA3Q8IX90 412 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 ZNF540Q8NDQ6 660 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 HIST1H2ACQ93077 130 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 ZNF566Q969W8 418 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 LRRC58Q96CX6 371 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 MSI2Q96DH6 328 aaKnown RBP14.95□□□□□ -0.02
LITAF-215ENST00000574763 SLC25A44Q96H78 314 aaPredicted RBP14.95□□□□□ -0.02
LITAF-215ENST00000574763 SH3GL1Q99961 368 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 ECSITQ9BQ95 431 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 PRSS27Q9BQR3 290 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 MEPEQ9NQ76 525 aaPredicted RBP14.95□□□□□ -0.02
LITAF-215ENST00000574763 LPAR3Q9UBY5 353 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 SPEF1Q9Y4P9 236 aa14.95□□□□□ -0.02
LITAF-215ENST00000574763 LOC100289279A0A1B0GTE1 492 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 RNF212BA8MTL3 300 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 VIMP08670 466 aaKnown RBP14.94□□□□□ -0.02
LITAF-215ENST00000574763 ADRA2AP08913 450 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 TROVE2P10155 538 aaKnown RBP eCLIP14.94□□□□□ -0.02
LITAF-215ENST00000574763 ZNF23P17027 643 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 TNFRSF1BP20333 461 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 GIFP27352 417 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 KLF10Q13118 480 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 MMEL1Q495T6 779 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 COQ5Q5HYK3 327 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 FAM166AQ6J272 317 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 LRFN4Q6PJG9 635 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 SLC22A24Q8N4F4 322 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 ARIH2OSQ8N7S6 290 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 OR8J3Q8NGG0 315 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 FGFBP3Q8TAT2 258 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 MRPL24Q96A35 216 aaKnown RBP14.94□□□□□ -0.02
LITAF-215ENST00000574763 MRPL37Q9BZE1 423 aaKnown RBP14.94□□□□□ -0.02
LITAF-215ENST00000574763 SHARPINQ9H0F6 387 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 MRGBPQ9NV56 204 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 FBXL3Q9UKT7 428 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 BAG5Q9UL15 447 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 KCNS2Q9ULS6 477 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 SH3GLB1Q9Y371 365 aa14.94□□□□□ -0.02
LITAF-215ENST00000574763 MRASO14807 208 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 SYNGR3O43761 229 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 NPPAP01160 153 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 PATE4P0C8F1 98 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 PGA4P0DJD7 388 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 PGA3P0DJD8 388 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 IGFBP5P24593 272 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 GLRXP35754 106 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 EVX1P49640 407 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 GALK2Q01415 458 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 SF3A3Q12874 501 aaKnown RBP eCLIP14.93□□□□□ -0.02
LITAF-215ENST00000574763 RAB39AQ14964 217 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 REP15Q6BDI9 236 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 TPK1Q9H3S4 243 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 CHODLQ9H9P2 273 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 FGFR1OP2Q9NVK5 253 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 TMEM38BQ9NVV0 291 aa14.93□□□□□ -0.02
LITAF-215ENST00000574763 BBIP1A8MTZ0 92 aa14.92□□□□□ -0.02
LITAF-215ENST00000574763 BLOC1S5-TXNDC5H3BN57 136 aa14.92□□□□□ -0.02
LITAF-215ENST00000574763 DHHO43323 396 aa14.92□□□□□ -0.02
LITAF-215ENST00000574763 SHOX2O60902 331 aaPredicted RBP14.92□□□□□ -0.02
LITAF-215ENST00000574763 ENTPD5O75356 428 aa14.92□□□□□ -0.02
LITAF-215ENST00000574763 BCL10O95999 233 aa14.92□□□□□ -0.02
LITAF-215ENST00000574763 MT-ND1P03886 318 aa14.92□□□□□ -0.02
LITAF-215ENST00000574763 OR8G3PP0DMU2 310 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms