RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 RBMX2Q9Y388 322 aaKnown RBP1.66□□□□□ -2.14
CHD3-217ENST00000574022 GOLT1BQ9Y3E0 138 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 CDH10Q9Y6N8 788 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 V9GY05 133 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 V9GYY5 206 aaPredicted RBP1.66□□□□□ -2.14
CHD3-217ENST00000574022 CNTNAP1P78357 1384 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 AQRO60306 1485 aaKnown RBP eCLIP1.66□□□□□ -2.14
CHD3-217ENST00000574022 ADGRA3Q8IWK6 1321 aa1.66□□□□□ -2.14
CHD3-217ENST00000574022 MSH6P52701 1360 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 IGKV2D-30A0A075B6S6 120 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 TRAV9-2A0A087WT02 112 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 IGHV1OR21-1A0A087WYE8 117 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 A0A0G2JRQ6 117 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 GLYATL1P3A0A0U1RQE8 302 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 TSPAN11A1L157 253 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 TRPC5OSA6NMA1 111 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 SOCS3O14543 225 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 RFXANKO14593 260 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 SLC9A3R1O14745 358 aaPredicted RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 GPAA1O43292 621 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 XRCC2O43543 280 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 GMDSO60547 372 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ENTPD5O75356 428 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ZNF254O75437 659 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 EIF3GO75821 320 aaKnown RBP eCLIP1.65□□□□□ -2.15
CHD3-217ENST00000574022 SMC2O95347 1197 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 LSM8O95777 96 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 STSP08842 583 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 OR8U8P0C7N1 319 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 TRIM49P0CI25 452 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 TRIM49CP0CI26 452 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 SLC35E2P0CK97 266 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 HPGDP15428 266 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 PSMC3P17980 439 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 CXCR2P25025 360 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 HTR2CP28335 458 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 IL12BP29460 328 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 OR1E1P30953 314 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 NTSP30990 170 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 CSKP41240 450 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 HTR2BP41595 481 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 GLP1RP43220 463 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 KIR2DS4P43632 304 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 KCNJ3P48549 501 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ATP12AP54707 1039 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 UGT2B15P54855 530 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ATP5J2P56134 94 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 HILS1P60008 231 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 SIGLEC14Q08ET2 396 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ELAVL2Q12926 359 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 PDIA2Q13087 525 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 STX3Q13277 289 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 TSC22D1Q15714 1073 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 AANATQ16613 207 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 LRRC36Q1X8D7 754 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 RPEL1Q2QD12 228 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 C18orf21Q32NC0 220 aaPredicted RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 TRMT5Q32P41 509 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 TMEM30BQ3MIR4 351 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 PTPN20Q4JDL3 420 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 PAN3Q58A45 887 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 TPRG1LQ5T0D9 272 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 CCDC122Q5T0U0 273 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 LCE4AQ5TA78 99 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 OLFML2AQ68BL7 652 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 C11orf71Q6IPW1 123 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ADNP2Q6IQ32 1131 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 PRMT9Q6P2P2 845 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 WDR74Q6RFH5 385 aaPredicted RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 TFAP2EQ6VUC0 442 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ZNF600Q6ZNG1 722 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 COPS6Q7L5N1 327 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 OR2W3Q7Z3T1 314 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 TMEM135Q86UB9 458 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 PPP1R27Q86WC6 154 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ZNF547Q8IVP9 402 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 LRRC8AQ8IWT6 810 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 KLHDC8BQ8IXV7 354 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 CADM2Q8N3J6 435 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ZNF557Q8N988 423 aaPredicted RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 CCDC71LQ8N9Z2 235 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 HSD17B11Q8NBQ5 300 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 CSNK1G2-AS1Q8NCQ2 148 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 OR4D6Q8NGJ1 314 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 OR6T1Q8NGN1 323 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ITLN1Q8WWA0 313 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 SLC25A38Q96DW6 304 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 MED8Q96G25 268 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ITCHQ96J02 903 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 RNF170Q96K19 258 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ARL5BQ96KC2 179 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ART5Q96L15 291 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 DUX3Q96PT4 197 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 OR5B12Q96R08 314 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 OR5M11Q96RB7 305 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 CYTH2Q99418 400 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 HIST1H4GQ99525 98 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 ACBD6Q9BR61 282 aa1.65□□□□□ -2.15
CHD3-217ENST00000574022 LLPHQ9BRT6 129 aaKnown RBP1.65□□□□□ -2.15
CHD3-217ENST00000574022 PELOQ9BRX2 385 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms