RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 OR8J3Q8NGG0 315 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 MS4A3Q96HJ5 214 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 KCNK17Q96T54 332 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 SLC19A3Q9BZV2 496 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 ZNF442Q9H7R0 627 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 MYOZ1Q9NP98 299 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 GID8Q9NWU2 228 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 GLTPQ9NZD2 209 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 ZNF229Q9UJW7 825 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 CMAHPQ9Y471 501 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 SPEF1Q9Y4P9 236 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 CAPN7Q9Y6W3 813 aa8.36□□□□□ -1.07
NPLOC4-212ENST00000573328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.35□□□□□ -1.075e-11■■■■□ 24.9
NPLOC4-212ENST00000573328 LOC100653049A0A140TA62 436 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 LOC390937A0A1W2PQ73 354 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 A0A1W2PRG6 482 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 FXYD1O00168 92 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 ENTPD5O75356 428 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 KRT34O76011 436 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 FARS2O95363 451 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 BCL10O95999 233 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 NPPAP01160 153 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 IGHG1P01857 330 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 APEHP13798 732 aaKnown RBP8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 OR1E2P47887 323 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 GIPRP48546 466 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 GZMKP49863 264 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 GZMMP51124 257 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 RAB1AP62820 205 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 GUCY1A3Q02108 690 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 CYB5R2Q6BCY4 276 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 TSPYL5Q86VY4 417 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 HIPK1Q86Z02 1210 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 CDK20Q8IZL9 346 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 LRRC17Q8N6Y2 441 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 OR6X1Q8NH79 312 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 PFN4Q8NHR9 129 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 TMEM255BQ8WV15 326 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 SLC25A44Q96H78 314 aaPredicted RBP8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 TPD52L3Q96J77 140 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 PCDHAC1Q9H158 963 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 TPK1Q9H3S4 243 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 RNF121Q9H920 327 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 CHODLQ9H9P2 273 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 SAR1AQ9NR31 198 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 TAS2R5Q9NYW4 299 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 FBXL3Q9UKT7 428 aa8.35□□□□□ -1.07
NPLOC4-212ENST00000573328 CUBNO60494 3623 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 MXRA5Q9NR99 2828 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 FAM220BPB1ANY3 271 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 DHHO43323 396 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 OR5F1O95221 314 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 LYPD3O95274 346 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 MT-ND1P03886 318 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 F13BP05160 661 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 ADRA2AP08913 450 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 ASAH2BP0C7U1 165 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 PATE4P0C8F1 98 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 OR8G3PP0DMU2 310 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 IGHV4-31P0DP07 118 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 DAOP14920 347 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 ZNF14P17017 642 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 NR4A1P22736 598 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 IFNA8P32881 189 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 RBM34P42696 430 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 NR4A2P43354 598 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 ZNF84P51523 738 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 CRYBA2P53672 197 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 UGT2B15P54855 530 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 RPS23P62266 143 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 MYBPC1Q00872 1141 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 RPL18Q07020 188 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 ZP4Q12836 540 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 RAB39AQ14964 217 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 CYBRD1Q53TN4 286 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 FAM166AQ6J272 317 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 CGB2Q6NT52 195 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 TMEM53Q6P2H8 277 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 PODNL1Q6PEZ8 512 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 ZNF627Q7L945 461 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 PIWIL3Q7Z3Z3 882 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 HDDC2Q7Z4H3 204 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 CALHM3Q86XJ0 350 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 NKAIN4Q8IVV8 208 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 ZCCHC24Q8N2G6 241 aaKnown RBP8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 SLC22A24Q8N4F4 322 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 POU5F2Q8N7G0 328 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 ZNF540Q8NDQ6 660 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 NOXO1Q8NFA2 376 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 OR2T12Q8NG77 320 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 C10orf82Q8WW14 230 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 TMEM239Q8WW34 195 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 NEU4Q8WWR8 484 aaPredicted RBP8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 TMEM54Q969K7 222 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 RCN3Q96D15 328 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 SGTBQ96EQ0 304 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 FOXN4Q96NZ1 517 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 SH3GL3Q99963 347 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 SYT3Q9BQG1 590 aa8.34□□□□□ -1.07
NPLOC4-212ENST00000573328 PRSS27Q9BQR3 290 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms