RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 FXYD1O00168 92 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 RNF13O43567 381 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 SASH3O75995 380 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 RAB36O95755 333 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 ERCC1P07992 297 aaPredicted RBP14.96□□□□□ -0.01
LITAF-211ENST00000572255 APEHP13798 732 aaKnown RBP14.96□□□□□ -0.01
LITAF-211ENST00000572255 NR4A1P22736 598 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 GIPRP48546 466 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 PTDSS1P48651 473 aaKnown RBP14.96□□□□□ -0.01
LITAF-211ENST00000572255 RAB1AP62820 205 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.96□□□□□ -0.012e-6■■□□□ 13.8
LITAF-211ENST00000572255 SPATA3Q8NHX4 192 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 NEU4Q8WWR8 484 aaPredicted RBP14.96□□□□□ -0.01
LITAF-211ENST00000572255 BEX2Q9BXY8 128 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 BPESC1Q9GZL8 116 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 DENND2DQ9H6A0 471 aaPredicted RBP14.96□□□□□ -0.01
LITAF-211ENST00000572255 DYNLRB1Q9NP97 96 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 GLTPQ9NZD2 209 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 CMAHPQ9Y471 501 aa14.96□□□□□ -0.01
LITAF-211ENST00000572255 CUBNO60494 3623 aa14.96□□□□□ -0.02
LITAF-211ENST00000572255 LMX1BO60663 402 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 UBL3O95164 117 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 STAMBPO95630 424 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 HIST1H2ABP04908 130 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 IGFBP1P08833 259 aaPredicted RBP14.95□□□□□ -0.02
LITAF-211ENST00000572255 ASAH2BP0C7U1 165 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 UMPSP11172 480 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 ZNF35P13682 527 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 DAOP14920 347 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 MELKQ14680 651 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 MSMPQ1L6U9 139 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 IQCCQ4KMZ1 466 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 HIST3H2AQ7L7L0 130 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 PIWIL3Q7Z3Z3 882 aaKnown RBP14.95□□□□□ -0.02
LITAF-211ENST00000572255 NANOGNBQ7Z5D8 188 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 CARM1Q86X55 608 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 CALHM3Q86XJ0 350 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 SKA3Q8IX90 412 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 ZNF540Q8NDQ6 660 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 HIST1H2ACQ93077 130 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 ZNF566Q969W8 418 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 LRRC58Q96CX6 371 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 MSI2Q96DH6 328 aaKnown RBP14.95□□□□□ -0.02
LITAF-211ENST00000572255 SLC25A44Q96H78 314 aaPredicted RBP14.95□□□□□ -0.02
LITAF-211ENST00000572255 SH3GL1Q99961 368 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 ECSITQ9BQ95 431 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 PRSS27Q9BQR3 290 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 MEPEQ9NQ76 525 aaPredicted RBP14.95□□□□□ -0.02
LITAF-211ENST00000572255 LPAR3Q9UBY5 353 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 SPEF1Q9Y4P9 236 aa14.95□□□□□ -0.02
LITAF-211ENST00000572255 LOC100289279A0A1B0GTE1 492 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 RNF212BA8MTL3 300 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 VIMP08670 466 aaKnown RBP14.94□□□□□ -0.02
LITAF-211ENST00000572255 ADRA2AP08913 450 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 TROVE2P10155 538 aaKnown RBP eCLIP14.94□□□□□ -0.02
LITAF-211ENST00000572255 ZNF23P17027 643 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 TNFRSF1BP20333 461 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 GIFP27352 417 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 KLF10Q13118 480 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 MMEL1Q495T6 779 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 COQ5Q5HYK3 327 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 FAM166AQ6J272 317 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 LRFN4Q6PJG9 635 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 SLC22A24Q8N4F4 322 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 ARIH2OSQ8N7S6 290 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 OR8J3Q8NGG0 315 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 FGFBP3Q8TAT2 258 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 MRPL24Q96A35 216 aaKnown RBP14.94□□□□□ -0.02
LITAF-211ENST00000572255 MRPL37Q9BZE1 423 aaKnown RBP14.94□□□□□ -0.02
LITAF-211ENST00000572255 SHARPINQ9H0F6 387 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 MRGBPQ9NV56 204 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 FBXL3Q9UKT7 428 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 BAG5Q9UL15 447 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 KCNS2Q9ULS6 477 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 SH3GLB1Q9Y371 365 aa14.94□□□□□ -0.02
LITAF-211ENST00000572255 MRASO14807 208 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 SYNGR3O43761 229 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 NPPAP01160 153 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 PATE4P0C8F1 98 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 PGA4P0DJD7 388 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 PGA3P0DJD8 388 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 IGFBP5P24593 272 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 GLRXP35754 106 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 EVX1P49640 407 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 GALK2Q01415 458 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 SF3A3Q12874 501 aaKnown RBP eCLIP14.93□□□□□ -0.02
LITAF-211ENST00000572255 RAB39AQ14964 217 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 REP15Q6BDI9 236 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 TPK1Q9H3S4 243 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 CHODLQ9H9P2 273 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 FGFR1OP2Q9NVK5 253 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 TMEM38BQ9NVV0 291 aa14.93□□□□□ -0.02
LITAF-211ENST00000572255 BBIP1A8MTZ0 92 aa14.92□□□□□ -0.02
LITAF-211ENST00000572255 BLOC1S5-TXNDC5H3BN57 136 aa14.92□□□□□ -0.02
LITAF-211ENST00000572255 DHHO43323 396 aa14.92□□□□□ -0.02
LITAF-211ENST00000572255 SHOX2O60902 331 aaPredicted RBP14.92□□□□□ -0.02
LITAF-211ENST00000572255 ENTPD5O75356 428 aa14.92□□□□□ -0.02
LITAF-211ENST00000572255 BCL10O95999 233 aa14.92□□□□□ -0.02
LITAF-211ENST00000572255 MT-ND1P03886 318 aa14.92□□□□□ -0.02
LITAF-211ENST00000572255 OR8G3PP0DMU2 310 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms