RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 A0A087X0M5 115 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 A0A1B0GX30 115 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 GJE1A6NN92 205 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 SRRM5B3KS81 715 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 FXYD1O00168 92 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 SLC28A1O00337 649 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 FOXE1O00358 373 aaPredicted RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 MANBAO00462 879 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 ACOT8O14734 319 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 MRASO14807 208 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 LSM1O15116 133 aaKnown RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 XPNPEP2O43895 674 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 CRCPO75575 148 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 RP2O75695 350 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 BCAS2O75934 225 aaPredicted RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 KRT36O76013 467 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 ANP32DO95626 131 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 KRT6AP02538 564 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 KRT6BP04259 564 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 HSD17B1P14061 328 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 CDH2P19022 906 aaPredicted RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 CSNK2A2P19784 350 aaPredicted RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 FUT4P22083 530 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 HMOX2P30519 316 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 PTDSS1P48651 473 aaKnown RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 KRT6CP48668 564 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 HTR6P50406 440 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 ARFIP1P53367 373 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 RAC3P60763 192 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 PSME3P61289 254 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 PRR5P85299 388 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 MAD2L1Q13257 205 aaPredicted RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 RCN1Q15293 331 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 HIKESHIQ53FT3 197 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 LIPJQ5W064 366 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 REP15Q6BDI9 236 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 ANKRD16Q6P6B7 361 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 KLHL24Q6TFL4 600 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 RNF144BQ7Z419 303 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 TSPYL5Q86VY4 417 aaPredicted RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 NUDT13Q86X67 352 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 DDIASQ8IXT1 998 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 MFSD4AQ8N468 514 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 DPP10Q8N608 796 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 NKAIN3Q8N8D7 197 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 GLB1L3Q8NCI6 653 aaPredicted RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 NUP37Q8NFH4 326 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 FBLIM1Q8WUP2 373 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 RAB8BQ92930 207 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 METTL2AQ96IZ6 378 aaKnown RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 FCRL1Q96LA6 429 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 PPP3R2Q96LZ3 170 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 CDRT15Q96T59 188 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 MTERF1Q99551 399 aaKnown RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 ASCL2Q99929 193 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 SEC61A2Q9H9S3 476 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 S100A14Q9HCY8 104 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 CCDC167Q9P0B6 97 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 KIF17Q9P2E2 1029 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 SEC14L4Q9UDX3 406 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 MALT1Q9UDY8 824 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 CES1P1Q9UKY3 287 aa5.85□□□□□ -1.47
CHD3-213ENST00000571249 NOSIPQ9Y314 301 aaKnown RBP5.85□□□□□ -1.47
CHD3-213ENST00000571249 OR6C65A6NJZ3 312 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 H3BNX3 289 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 PDLIM1O00151 329 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 CASQ2O14958 399 aaPredicted RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 TRAF3IP2O43734 574 aaPredicted RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 CDC14BO60729 498 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 SLC22A3O75751 556 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 RSL1D1O76021 490 aaKnown RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 NCR1O76036 304 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 UTS2O95399 124 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 ALOX5P09917 674 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 VHLP40337 213 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 MRPS11P82912 194 aaKnown RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 FOXF1Q12946 379 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 ZNF154Q13106 437 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 KIAA0040Q15053 153 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 TIGD6Q17RP2 521 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 DEFB112Q30KQ8 113 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 ATP6AP1LQ52LC2 224 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 SAMD4BQ5PRF9 694 aaKnown RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 OTUD3Q5T2D3 398 aaPredicted RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 SLC48A1Q6P1K1 146 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 ZFP1Q6P2D0 407 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 C9orf139Q6ZV77 190 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 MOGAT3Q86VF5 341 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 ADGRG3Q86Y34 549 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 LYSMD2Q8IV50 215 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 FAM9CQ8IZT9 166 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 GATSQ8NAP1 163 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 HIPK4Q8NE63 616 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 OR52E2Q8NGJ4 325 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 OR9I1Q8NGQ6 314 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 ZFP90Q8TF47 636 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 DDB2Q92466 427 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 STMN2Q93045 179 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 ATP6V1E2Q96A05 226 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms