RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CRLF3Q8IUI8 442 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 C10orf107Q8IVU9 208 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 FAM9CQ8IZT9 166 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 POGLUT1Q8NBL1 392 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 APCDD1LQ8NCL9 501 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 CATSPER1Q8NEC5 780 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 NFAM1Q8NET5 270 aaPredicted RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 TSPAN14Q8NG11 270 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 OR7G1Q8NGA0 311 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 OR10G8Q8NGN5 311 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SLC22A8Q8TCC7 542 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 TCP10LQ8TDR4 215 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 AGAP11Q8TF27 550 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 NCLNQ969V3 563 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 ANKRD9Q96BM1 317 aaPredicted RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 ERP27Q96DN0 273 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SPDL1Q96EA4 605 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 FAM111AQ96PZ2 611 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 PYGO2Q9BRQ0 406 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 CLEC7AQ9BXN2 247 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 OR2B2Q9GZK3 357 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 AICDAQ9GZX7 198 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 MIEF1Q9NQG6 463 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 FARSBQ9NSD9 589 aaKnown RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 OLAHQ9NV23 265 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 HPF1Q9NWY4 346 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 C1orf109Q9NX04 203 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 NKIRAS1Q9NYS0 192 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 EMCNQ9ULC0 261 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 ENTPD4Q9Y227 616 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 KLF13Q9Y2Y9 288 aaPredicted RBP3.39□□□□□ -1.87
NUP88-202ENST00000570937 TMED5Q9Y3A6 229 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 ASB4Q9Y574 426 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 TIMM22Q9Y584 194 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 CACNA1GO43497 2377 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 HEATR5BQ9P2D3 2071 aa3.39□□□□□ -1.87
NUP88-202ENST00000570937 SNRNP200O75643 2136 aaKnown RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 PCNX3Q9H6A9 2034 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 C2orf92A0A1B0GVN3 265 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 A0A1B0GVY2 172 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ENO4A6NNW6 628 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 TCP11X1B4DZS4 312 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 C4orf51C9J302 202 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 WWP2O00308 870 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 TP53I11O14683 189 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 PGRMC2O15173 223 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 TYROBPO43914 113 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ERAL1O75616 437 aaKnown RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 OR2J2O76002 312 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ETHE1O95571 254 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 HSPA4LO95757 839 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 AIFM1O95831 613 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 IGHV2-70P01814 119 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 P04436 131 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ATP1B1P05026 303 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ANXA4P09525 319 aaPredicted RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 LINGO3P0C6S8 592 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 CPMP14384 443 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 NT5EP21589 574 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ALDH3A1P30838 453 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 TIA1P31483 386 aaKnown RBP eCLIP3.38□□□□□ -1.87
NUP88-202ENST00000570937 KRT20P35900 424 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 MNDAP41218 407 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ASMTP46597 345 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 RPL14P50914 215 aaKnown RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 HNRNPFP52597 415 aaKnown RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 SLC18A1P54219 525 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 HMGCS1Q01581 520 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ZNF763Q0D2J5 394 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 C2orf80Q0P641 193 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 IGFBP7Q16270 282 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 UGT3A2Q3SY77 523 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ATP6AP1LQ52LC2 224 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 FHL5Q5TD97 284 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 SLC22A10Q63ZE4 541 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 SPINK14Q6IE38 97 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 SLC25A25Q6KCM7 469 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 NOXRED1Q6NXP6 359 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 FIP1L1Q6UN15 594 aaKnown RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 RTL4Q6ZR62 310 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 RGS9BPQ6ZS82 235 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 RNF165Q6ZSG1 346 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 RPS27LQ71UM5 84 aaKnown RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 RTN4RL2Q86UN3 420 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 OR4N5Q8IXE1 308 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 EID3Q8N140 333 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 CYP4Z2PQ8N1L4 340 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 LRRC25Q8N386 305 aaPredicted RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 RNF175Q8N4F7 328 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 KIF2BQ8N4N8 673 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 NATD1Q8N6N6 113 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ST6GALNAC3Q8NDV1 305 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 C17orf47Q8NEP4 570 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 NUBPLQ8TB37 319 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 ZNF721Q8TF20 911 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 PPWD1Q96BP3 646 aaKnown RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 TM4SF18Q96CE8 201 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 SNRNP40Q96DI7 357 aaKnown RBP3.38□□□□□ -1.87
NUP88-202ENST00000570937 ARSGQ96EG1 525 aa3.38□□□□□ -1.87
NUP88-202ENST00000570937 DTNBP1Q96EV8 351 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms