RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 USP22Q9UPT9 525 aa12.56□□□□□ -0.4
CMTM3-215ENST00000568477 POFUT2Q9Y2G5 429 aa12.56□□□□□ -0.4
CMTM3-215ENST00000568477 SH3GLB1Q9Y371 365 aa12.56□□□□□ -0.4
CMTM3-215ENST00000568477 FAM220BPB1ANY3 271 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 INAFM1C9JVW0 142 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 C11orf98E9PRG8 122 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 HIST1H2ABP04908 130 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 ARR3P36575 388 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 CSNK1A1P48729 337 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 IDH3GP51553 393 aaPredicted RBP12.55□□□□□ -0.4
CMTM3-215ENST00000568477 SNRPD2P62316 118 aaKnown RBP12.55□□□□□ -0.4
CMTM3-215ENST00000568477 CAMK2DQ13557 499 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 SPATS1Q496A3 300 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 HIST3H2AQ7L7L0 130 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 OR4F15Q8NGB8 312 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 HTRA1Q92743 480 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 HIST1H2ACQ93077 130 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 ZNF583Q96ND8 569 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 ZNF426Q9BUY5 554 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 POLR2J2Q9GZM3 115 aaKnown RBP12.55□□□□□ -0.4
CMTM3-215ENST00000568477 POLR2J3Q9H1A7 115 aaKnown RBP12.55□□□□□ -0.4
CMTM3-215ENST00000568477 DCLRE1BQ9H816 532 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 SEC61A2Q9H9S3 476 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 CA10Q9NS85 328 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 ZNF229Q9UJW7 825 aa12.55□□□□□ -0.4
CMTM3-215ENST00000568477 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 IGHV4-30-2A0A087WSY4 118 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 ENTPD5O75356 428 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 PDE5AO76074 875 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 TP53P04637 393 aaPredicted RBP12.54□□□□□ -0.4
CMTM3-215ENST00000568477 CELA3BP08861 270 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 UMPSP11172 480 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 IFNGR1P15260 489 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 TNFRSF1BP20333 461 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 CALCRP30988 508 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 SERPINF1P36955 418 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 EFNA4P52798 201 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 BIDP55957 195 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 TAS2R41P59536 307 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 ZP4Q12836 540 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 NPRL3Q12980 569 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 SWI5Q1ZZU3 235 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 LRRC23Q53EV4 343 aaPredicted RBP12.54□□□□□ -0.4
CMTM3-215ENST00000568477 VHLLQ6RSH7 139 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 ZNF813Q6ZN06 617 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 DEF8Q6ZN54 512 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 SLC35D2Q76EJ3 337 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 NANOGNBQ7Z5D8 188 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 MDP1Q86V88 176 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 WDFY1Q8IWB7 410 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 OR2T12Q8NG77 320 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 STMN2Q93045 179 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 PRSS27Q9BQR3 290 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 RNPEPL1Q9HAU8 725 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 POMPQ9Y244 141 aa12.54□□□□□ -0.4
CMTM3-215ENST00000568477 IGHV2OR16-5A0A0B4J2B6 119 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 ZNF503-AS2A6NEH8 195 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 B9A039 149 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 RNF13O43567 381 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 FKBP6O75344 327 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 OR5F1O95221 314 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 HLA-HP01893 362 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 CSF3P09919 207 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 OR4A8P0C604 315 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 B4GALT1P15291 398 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 RBM34P42696 430 aaKnown RBP12.53□□□□□ -0.4
CMTM3-215ENST00000568477 ADIPOQQ15848 244 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 GSG1Q2KHT4 349 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 MST1LQ2TV78 715 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 CYBRD1Q53TN4 286 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 ZNF627Q7L945 461 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 SLC46A3Q7Z3Q1 461 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 ARPINQ7Z6K5 226 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 MYPOPQ86VE0 399 aaPredicted RBP12.53□□□□□ -0.4
CMTM3-215ENST00000568477 MICU2Q8IYU8 434 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 LRRC17Q8N6Y2 441 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 ZNF525Q8N782 197 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 NUP37Q8NFH4 326 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 IL17RDQ8NFM7 739 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 OR10H5Q8NGA6 315 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 OR6X1Q8NH79 312 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 NANOS1Q8WY41 292 aaKnown RBP12.53□□□□□ -0.4
CMTM3-215ENST00000568477 FOXB1Q99853 325 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 SPAG4Q9NPE6 437 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 TAS2R5Q9NYW4 299 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 AP3M1Q9Y2T2 418 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 FKBP7Q9Y680 259 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 CR1P17927 2039 aa12.53□□□□□ -0.4
CMTM3-215ENST00000568477 ELOVL7A1L3X0 281 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 VSTM5A8MXK1 200 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 MT-ND1P03886 318 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 ASAH2BP0C7U1 165 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 THRBP10828 461 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 CD79AP11912 226 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 SLC25A16P16260 332 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 KDELR2P33947 212 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 OR1E2P47887 323 aa12.52□□□□□ -0.41
CMTM3-215ENST00000568477 HGFACQ04756 655 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 146.3 ms