RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 NEU4Q8WWR8 484 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-216ENST00000567023 TMEM54Q969K7 222 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 KCNK17Q96T54 332 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 FOXB1Q99853 325 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 PRSS27Q9BQR3 290 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF229Q9UJW7 825 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 SLC7A7Q9UM01 511 aa12.31□□□□□ -0.44
COMMD4-216ENST00000567023 C11orf98E9PRG8 122 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 SLC22A2O15244 555 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 CH25HO95992 272 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 IGF2P01344 180 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 ERCC1P07992 297 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-216ENST00000567023 IGFBP1P08833 259 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-216ENST00000567023 CD79AP11912 226 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 LSP1P33241 339 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 CSNK1A1P48729 337 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 SEC24CP53992 1094 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 BIDP55957 195 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 RAB1AP62820 205 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 PIGFQ07326 219 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 KLF10Q13118 480 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 SNTB2Q13425 540 aaKnown RBP12.3□□□□□ -0.44
COMMD4-216ENST00000567023 SLC35D2Q76EJ3 337 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 SPATA21Q7Z572 469 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 LRRC17Q8N6Y2 441 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 OR8J3Q8NGG0 315 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 VANGL1Q8TAA9 524 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-216ENST00000567023 SLC26A7Q8TE54 656 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 LRRC58Q96CX6 371 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 SLC25A44Q96H78 314 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-216ENST00000567023 MS4A3Q96HJ5 214 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 POLR2J2Q9GZM3 115 aaKnown RBP12.3□□□□□ -0.44
COMMD4-216ENST00000567023 POLR2J3Q9H1A7 115 aaKnown RBP12.3□□□□□ -0.44
COMMD4-216ENST00000567023 GLTPQ9NZD2 209 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 LPAR3Q9UBY5 353 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 FBXL3Q9UKT7 428 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 CMAHPQ9Y471 501 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 SPEF1Q9Y4P9 236 aa12.3□□□□□ -0.44
COMMD4-216ENST00000567023 IGHV4-61A0A0C4DH41 118 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 FXYD1O00168 92 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 LMX1BO60663 402 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 UBL3O95164 117 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 STAMBPO95630 424 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 B4GALT1P15291 398 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 DRD4P21917 467 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 THBS2P35442 1172 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 GLRXP35754 106 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 GGTLC2Q14390 218 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 HIST3H3Q16695 136 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 KRT80Q6KB66 452 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 LRFN4Q6PJG9 635 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 ZCCHC24Q8N2G6 241 aaKnown RBP12.29□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF786Q8N393 782 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 SVOPLQ8N434 492 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF566Q969W8 418 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 MSI2Q96DH6 328 aaKnown RBP12.29□□□□□ -0.44
COMMD4-216ENST00000567023 BPESC1Q9GZL8 116 aa12.29□□□□□ -0.44
COMMD4-216ENST00000567023 MEPEQ9NQ76 525 aaPredicted RBP12.29□□□□□ -0.44
COMMD4-216ENST00000567023 MALRD1Q5VYJ5 2156 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 BBIP1A8MTZ0 92 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 RNF13O43567 381 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 ENTPD5O75356 428 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 SERPINI2O75830 405 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 MT-ND1P03886 318 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 HIST1H2ABP04908 130 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 SERPINA5P05154 406 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 TACSTD2P09758 323 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 PGA4P0DJD7 388 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 PGA3P0DJD8 388 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 DAOP14920 347 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF23P17027 643 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 RBM34P42696 430 aaKnown RBP12.28□□□□□ -0.44
COMMD4-216ENST00000567023 GIPRP48546 466 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 PTDSS1P48651 473 aaKnown RBP12.28□□□□□ -0.44
COMMD4-216ENST00000567023 GYS2P54840 703 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 MAPRE2Q15555 327 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 FXNQ16595 210 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 NRN1LQ496H8 165 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 RABL3Q5HYI8 236 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 HIST3H2AQ7L7L0 130 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF584Q8IVC4 421 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 SKA3Q8IX90 412 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 CDK20Q8IZL9 346 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 SLC22A24Q8N4F4 322 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 LIPHQ8WWY8 451 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 MRPL24Q96A35 216 aaKnown RBP12.28□□□□□ -0.44
COMMD4-216ENST00000567023 ZNF583Q96ND8 569 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 SEPHS2Q99611 448 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 ECSITQ9BQ95 431 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 BEX2Q9BXY8 128 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 BAG5Q9UL15 447 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 SH3GLB1Q9Y371 365 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 CAPN7Q9Y6W3 813 aa12.28□□□□□ -0.44
COMMD4-216ENST00000567023 GMNCA6NCL1 334 aa12.27□□□□□ -0.45
COMMD4-216ENST00000567023 CENPBD1B2RD01 187 aa12.27□□□□□ -0.45
COMMD4-216ENST00000567023 SYNGR3O43761 229 aa12.27□□□□□ -0.45
COMMD4-216ENST00000567023 MGRN1O60291 552 aa12.27□□□□□ -0.45
COMMD4-216ENST00000567023 SNX3O60493 162 aa12.27□□□□□ -0.45
COMMD4-216ENST00000567023 CCDC22O60826 627 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms