RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SLC25A48Q6ZT89 311 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 FOXL2NBQ6ZUU3 175 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 GPRIN3Q6ZVF9 776 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SLC35D2Q76EJ3 337 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SETD3Q86TU7 594 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 APRG1Q8IVJ8 170 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 KRT222Q8N1A0 295 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SYS1Q8N2H4 156 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 MREGQ8N565 214 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 C9orf106Q8NAJ2 232 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 OR5K2Q8NHB8 316 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CDC26Q8NHZ8 85 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SPPL2AQ8TCT8 520 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ADAMTS16Q8TE57 1224 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CXorf40AQ8TE69 158 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CRYGNQ8WXF5 182 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CDKL2Q92772 493 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 RPL36ALQ969Q0 106 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 DYNLL2Q96FJ2 89 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ATXN7L3BQ96GX2 97 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 TMEM80Q96HE8 168 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 B3GALT6Q96L58 329 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 KCNA7Q96RP8 456 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SORT1Q99523 831 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CTRCQ99895 268 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SH3GL1Q99961 368 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 MRPL45Q9BRJ2 306 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 TM2D1Q9BX74 207 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SAV1Q9H4B6 383 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 KIR3DX1Q9H7L2 352 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF71Q9NQZ8 489 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 MCUBQ9NWR8 336 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 RBAKQ9NYW8 714 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 EHFQ9NZC4 300 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 THYN1Q9P016 225 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 EMC3Q9P0I2 261 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SENP1Q9P0U3 644 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 TMEM181Q9P2C4 612 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PRODH2Q9UF12 536 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CLEC2DQ9UHP7 191 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 KIF25Q9UIL4 384 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 NXT1Q9UKK6 140 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 PSMD13Q9UNM6 376 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 RCL1Q9Y2P8 373 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 TSSC4Q9Y5U2 329 aaPredicted RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CPQQ9Y646 472 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 SAR1BQ9Y6B6 198 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 CDH10Q9Y6N8 788 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 ZCCHC6Q5VYS8 1495 aaKnown RBP2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 EP400Q96L91 3159 aa2.75□□□□□ -1.97
HERPUD1-211ENST00000566550 C3P01024 1663 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ZNF142P52746 1687 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ROBO1Q9Y6N7 1651 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 MED14O60244 1454 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 LRRC9Q6ZRR7 1453 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 IGHV3-20A0A0C4DH32 117 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 LOC100131303A0A0U1RQF7 123 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 A0A1W2PRF3 423 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 A0A1W2PRM7 423 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 FABP12A6NFH5 140 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SLC22A20A6NK97 555 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SMIM1B2RUZ4 78 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 E7EWF7 191 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 E9PLD3 99 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 PRAMEF26H0Y7S4 382 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 PDHXO00330 501 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 FRAT2O75474 233 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 NOL4O94818 638 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 MYO1DO94832 1006 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 VAPBO95292 243 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 TNFAIP8O95379 198 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 IGHV3-9P01782 118 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CRYAAP02489 173 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SERPINB2P05120 415 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 C2P06681 752 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CD48P09326 243 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CTRB1P17538 263 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 PGAM1P18669 254 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 PRKACGP22612 351 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 OR1E1P30953 314 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 FOXN2P32314 431 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 S100A5P33763 92 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SHMT2P34897 504 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 VHLP40337 213 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CSKP41240 450 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 RANBP1P43487 201 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 YAP1P46937 504 aaKnown RBP2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 FBXW4P57775 412 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 GPX6P59796 221 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 KRTAP10-6P60371 365 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ERVK-16P61578 105 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 ECH1Q13011 328 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 SERTAD2Q14140 314 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 GNA13Q14344 377 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 KCTD19Q17RG1 926 aaPredicted RBP2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 C5orf47Q569G3 176 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 PAN3Q58A45 887 aaKnown RBP2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 CDKL4Q5MAI5 379 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 UTF1Q5T230 341 aa2.74□□□□□ -1.97
HERPUD1-211ENST00000566550 GPRC6AQ5T6X5 926 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms