RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SVOPLQ8N434 492 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 SPATA3Q8NHX4 192 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 TMEM54Q969K7 222 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 ZNF566Q969W8 418 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 LRRC58Q96CX6 371 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 FOXN4Q96NZ1 517 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 TAS2R5Q9NYW4 299 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 GLTPQ9NZD2 209 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 LPAR3Q9UBY5 353 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 BAG5Q9UL15 447 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 CMAHPQ9Y471 501 aa17.44■□□□□ 0.38
CLN6-207ENST00000566347 BBIP1A8MTZ0 92 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 KPNA4O00629 521 aaPredicted RBP17.43■□□□□ 0.38
CLN6-207ENST00000566347 SASH3O75995 380 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 FAM157CP0CG43 387 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 UMPSP11172 480 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 ZNF14P17017 642 aaPredicted RBP17.43■□□□□ 0.38
CLN6-207ENST00000566347 ZNF16P17020 682 aaPredicted RBP17.43■□□□□ 0.38
CLN6-207ENST00000566347 PTDSS1P48651 473 aaKnown RBP17.43■□□□□ 0.38
CLN6-207ENST00000566347 CRYBA2P53672 197 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 PIGFQ07326 219 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 MAPRE2Q15555 327 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 RABL3Q5HYI8 236 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 TSPYL5Q86VY4 417 aaPredicted RBP17.43■□□□□ 0.38
CLN6-207ENST00000566347 CALHM3Q86XJ0 350 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 SLC25A44Q96H78 314 aaPredicted RBP17.43■□□□□ 0.38
CLN6-207ENST00000566347 ZNF75AQ96N20 296 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 POLR2J2Q9GZM3 115 aaKnown RBP17.43■□□□□ 0.38
CLN6-207ENST00000566347 POLR2J3Q9H1A7 115 aaKnown RBP17.43■□□□□ 0.38
CLN6-207ENST00000566347 DYNLRB1Q9NP97 96 aa17.43■□□□□ 0.38
CLN6-207ENST00000566347 TMEM129A0AVI4 362 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 FXYD1O00168 92 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 IFNA14P01570 189 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 ASAH2BP0C7U1 165 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 ZNF35P13682 527 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 APEHP13798 732 aaKnown RBP17.42■□□□□ 0.38
CLN6-207ENST00000566347 GIPRP48546 466 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 EVX1P49640 407 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 ARFIP2P53365 341 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 RAB1AP62820 205 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 IQCCQ4KMZ1 466 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 ERICH5Q6P6B1 374 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 NANOGNBQ7Z5D8 188 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 CARM1Q86X55 608 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 LRRC17Q8N6Y2 441 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 MS4A3Q96HJ5 214 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 BEX2Q9BXY8 128 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 ZNF224Q9NZL3 707 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 SH3GLB1Q9Y371 365 aa17.42■□□□□ 0.38
CLN6-207ENST00000566347 MALRD1Q5VYJ5 2156 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 MRASO14807 208 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 LMX1BO60663 402 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 DAOP14920 347 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 LSP1P33241 339 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 GLRXP35754 106 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 RBM34P42696 430 aaKnown RBP17.41■□□□□ 0.38
CLN6-207ENST00000566347 TAS2R41P59536 307 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 RPS23P62266 143 aaKnown RBP17.41■□□□□ 0.38
CLN6-207ENST00000566347 GALK2Q01415 458 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 REP15Q6BDI9 236 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 FAM166AQ6J272 317 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 CDK20Q8IZL9 346 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 PCYOX1LQ8NBM8 494 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 MRPL24Q96A35 216 aaKnown RBP17.41■□□□□ 0.38
CLN6-207ENST00000566347 PRSS27Q9BQR3 290 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 SHARPINQ9H0F6 387 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 KCNS2Q9ULS6 477 aa17.41■□□□□ 0.38
CLN6-207ENST00000566347 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.4■□□□□ 0.381e-6■■□□□ 12.3
CLN6-207ENST00000566347 IGHV4-61A0A0C4DH41 118 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 SH3PXD2BA1X283 911 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 OR5F1O95221 314 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 FARS2O95363 451 aaKnown RBP17.4■□□□□ 0.38
CLN6-207ENST00000566347 STAMBPO95630 424 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 BCL10O95999 233 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 IGF2P01344 180 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 IGHG1P01857 330 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 MT-ND1P03886 318 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 OR8G3PP0DMU2 310 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 ZNF23P17027 643 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 GIFP27352 417 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 KLF10Q13118 480 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 MELKQ14680 651 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 GKAP1Q5VSY0 366 aaPredicted RBP17.4■□□□□ 0.38
CLN6-207ENST00000566347 HDDC2Q7Z4H3 204 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 DPPA2Q7Z7J5 298 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 SLC22A24Q8N4F4 322 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 BPESC1Q9GZL8 116 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 MEPEQ9NQ76 525 aaPredicted RBP17.4■□□□□ 0.38
CLN6-207ENST00000566347 SAR1AQ9NR31 198 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 FGFR1OP2Q9NVK5 253 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 TMEM38BQ9NVV0 291 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 GID8Q9NWU2 228 aa17.4■□□□□ 0.38
CLN6-207ENST00000566347 LOC100289279A0A1B0GTE1 492 aa17.39■□□□□ 0.37
CLN6-207ENST00000566347 A0A1W2PRG6 482 aa17.39■□□□□ 0.37
CLN6-207ENST00000566347 BLOC1S5-TXNDC5H3BN57 136 aa17.39■□□□□ 0.37
CLN6-207ENST00000566347 DHHO43323 396 aa17.39■□□□□ 0.37
CLN6-207ENST00000566347 SYNGR3O43761 229 aa17.39■□□□□ 0.37
CLN6-207ENST00000566347 SERPINA5P05154 406 aa17.39■□□□□ 0.37
CLN6-207ENST00000566347 ADRA2AP08913 450 aa17.39■□□□□ 0.37
CLN6-207ENST00000566347 PGA4P0DJD7 388 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms