RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 TCN1P20061 433 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-209ENST00000566240 CCT6AP40227 531 aaKnown RBP3.64□□□□□ -1.83
CNOT1-209ENST00000566240 NAA10P41227 235 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-209ENST00000566240 RFX3P48380 749 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 TMED10P49755 219 aaKnown RBP3.64□□□□□ -1.83
CNOT1-209ENST00000566240 RAB9AP51151 201 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 APOC4P55056 127 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 ARFRP1Q13795 201 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 SLC1A5Q15758 541 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 LY6G6FQ5SQ64 297 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 GPR157Q5UAW9 335 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 C9orf135Q5VTT2 229 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 TMEM53Q6P2H8 277 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 ZNF620Q6ZNG0 422 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 CCDC73Q6ZRK6 1079 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 LHFPL3Q86UP9 236 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 ZBED8Q8IZ13 594 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 PUSL1Q8N0Z8 303 aaKnown RBP3.64□□□□□ -1.83
CNOT1-209ENST00000566240 KIR2DL5AQ8N109 375 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 COMMD1Q8N668 190 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 ZNF557Q8N988 423 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-209ENST00000566240 OR1S2Q8NGQ3 325 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 KIR2DL5BQ8NHK3 375 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 C16orf74Q96GX8 76 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 KCTD14Q9BQ13 255 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-209ENST00000566240 OR51M1Q9H341 326 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 RANBP3Q9H6Z4 567 aaPredicted RBP3.64□□□□□ -1.83
CNOT1-209ENST00000566240 SLC25A22Q9H936 323 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 TNFRSF19Q9NS68 423 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 EXD2Q9NVH0 621 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 CALYQ9NYX4 217 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 SYCP2Q9BX26 1530 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 RLFQ13129 1914 aa3.64□□□□□ -1.83
CNOT1-209ENST00000566240 PLEKHG2Q9H7P9 1386 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 SAMD9LQ8IVG5 1584 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 C9orf84Q5VXU9 1444 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 ATP10BO94823 1461 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 C12orf77C9JDV5 145 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 BBOX1O75936 387 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 FGGP02679 453 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 ERCC1P07992 297 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 FMO3P31513 532 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 NPBWR2P48146 333 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 TAS2R19P59542 299 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 RAB10P61026 200 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 IRX3P78415 501 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 C22orf42Q6IC83 251 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 OTUD6AQ7L8S5 288 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 SSX9Q7RTT3 188 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 KATNAL2Q8IYT4 538 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 GABRG1Q8N1C3 465 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 FBXL16Q8N461 479 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 LIX1Q8N485 282 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 FBXL13Q8NEE6 735 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 OR4A4PQ8NGN8 299 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 NRGNQ92686 78 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 ANKRD9Q96BM1 317 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 B3GALT6Q96L58 329 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 SLC29A1Q99808 456 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 RARRES2Q99969 163 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 TMEM246Q9BRR3 403 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 IQCGQ9H095 443 aaKnown RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 PLGRKTQ9HBL7 147 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 FGF20Q9NP95 211 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 RPRD1BQ9NQG5 326 aaKnown RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 C20orf96Q9NUD7 363 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 NAP1L2Q9ULW6 460 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 PACSIN2Q9UNF0 486 aaPredicted RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 ABCC1P33527 1531 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 UNC13BO14795 1591 aa3.63□□□□□ -1.83
CNOT1-209ENST00000566240 PHF3Q92576 2039 aaKnown RBP3.63□□□□□ -1.83
CNOT1-209ENST00000566240 EIF2AK4Q9P2K8 1649 aaKnown RBP3.62□□□□□ -1.83
CNOT1-209ENST00000566240 ABCC10Q5T3U5 1492 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 WDR7Q9Y4E6 1490 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.62□□□□□ -1.83
CNOT1-209ENST00000566240 KDM5DQ9BY66 1539 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 KDM5BQ9UGL1 1544 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 GPATCH8Q9UKJ3 1502 aaKnown RBP3.62□□□□□ -1.83
CNOT1-209ENST00000566240 E7ENQ6 273 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 L7N2F9 121 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 RALBP11234 206 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 EIF2S2P20042 333 aaKnown RBP3.62□□□□□ -1.83
CNOT1-209ENST00000566240 GABRR1P24046 479 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 GTF2E2P29084 291 aaKnown RBP3.62□□□□□ -1.83
CNOT1-209ENST00000566240 BTCP35070 178 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 RORAP35398 523 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 ACVR1Q04771 509 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 LIPEQ05469 1076 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 REEP3Q6NUK4 255 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 SCARA5Q6ZMJ2 495 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 SLC16A14Q7RTX9 510 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 ARPC1AQ92747 370 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 RPUSD4Q96CM3 377 aaKnown RBP3.62□□□□□ -1.83
CNOT1-209ENST00000566240 MED8Q96G25 268 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 GSDMAQ96QA5 445 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 PLEKHF1Q96S99 279 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 HES7Q9BYE0 225 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 OR51J1Q9H342 316 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 CWH43Q9H720 699 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 SIAEQ9HAT2 523 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms