RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 YAP1P46937 504 aaKnown RBP11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 CSNK1A1P48729 337 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 NUDT6P53370 316 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 SH3BGRP55822 239 aaPredicted RBP11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 ST3GAL3Q11203 375 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 BNIP1Q12981 228 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 DNAL1Q4LDG9 190 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 HIST3H2AQ7L7L0 130 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 NANOGNBQ7Z5D8 188 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 MYPOPQ86VE0 399 aaPredicted RBP11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 C20orf196Q8IYI0 205 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 OFCC1Q8IZS5 231 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 HIST1H2ACQ93077 130 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 PYURFQ96I23 114 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 C7orf34Q96L11 122 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 ADAD1Q96M93 576 aaKnown RBP11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 ULBP2Q9BZM5 246 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 MUC13Q9H3R2 512 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 OBP2BQ9NPH6 170 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 B3GAT2Q9NPZ5 323 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 POFUT2Q9Y2G5 429 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 ENPP4Q9Y6X5 453 aa11.87□□□□□ -0.51
VPS9D1-204ENST00000565023 ARPC4-TTLL3A0A0A6YYG9 625 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 LOC102725191A0A1B0GVB3 256 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 ZNF503-AS2A6NEH8 195 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 FAM171A2A8MVW0 826 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 BLOC1S5-TXNDC5H3BN57 136 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 RPL36A-HNRNPH2H7BZ11 118 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 J3KTA2 159 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 PDE5AO76074 875 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 IGF2P01344 180 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 CRYAAP02489 173 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 SEMG1P04279 462 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 CECR9P0C854 216 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 CD79AP11912 226 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 FUT4P22083 530 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 IFNA8P32881 189 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 UGT2B15P54855 530 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 NAAAQ02083 359 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 PIGFQ07326 219 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 TRIM25Q14258 630 aaKnown RBP11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 RAB35Q15286 201 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 C11orf71Q6IPW1 123 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 ZNF813Q6ZN06 617 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 SLC35D2Q76EJ3 337 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 MDP1Q86V88 176 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 TMEM255BQ8WV15 326 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 BTBD10Q9BSF8 475 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 THTPAQ9BU02 230 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 MEPEQ9NQ76 525 aaPredicted RBP11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 MAN2C1Q9NTJ4 1040 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 NDUFAF4Q9P032 175 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 ARFGEF3Q5TH69 2177 aa11.86□□□□□ -0.51
VPS9D1-204ENST00000565023 ZNF99A8MXY4 864 aaPredicted RBP11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 GYG2O15488 501 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 PIP5K1CO60331 668 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 LY6HO94772 140 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 HLA-HP01893 362 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 MT-ND1P03886 318 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 B4GALT1P15291 398 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 ATP6V1B2P21281 511 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 CALCRP30988 508 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 APOBEC3AP31941 199 aaPredicted RBP11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 VLDLRP98155 873 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 MS4A2Q01362 244 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 CHRNB3Q05901 458 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 IQCCQ4KMZ1 466 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 MTX3Q5HYI7 312 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 LCN8Q6JVE9 175 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 ZNF544Q6NX49 715 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 PGM2L1Q6PCE3 622 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 SLC46A3Q7Z3Q1 461 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 PXKQ7Z7A4 578 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 ANKK1Q8NFD2 765 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 MAGEE2Q8TD90 523 aaPredicted RBP11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 TMEM239Q8WW34 195 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 SGTBQ96EQ0 304 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 FNDC11Q9BVV2 318 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 REG4Q9BYZ8 158 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 BARX1Q9HBU1 254 aaPredicted RBP11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 TAS2R5Q9NYW4 299 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 RHCGQ9UBD6 479 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 ZNF229Q9UJW7 825 aa11.85□□□□□ -0.51
VPS9D1-204ENST00000565023 MCIDASD6RGH6 385 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 OR7A10O76100 309 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 F13BP05160 661 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 CBR1P16152 277 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 RHCEP18577 417 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 FUT1P19526 365 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 MYBPC1Q00872 1141 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 TRAM2Q15035 370 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 ETFDHQ16134 617 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 CYP2R1Q6VVX0 501 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 CYP4Z1Q86W10 505 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 DHFR2Q86XF0 187 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 MEX3DQ86XN8 651 aaKnown RBP11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 LIPHQ8WWY8 451 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 ASB9Q96DX5 294 aa11.84□□□□□ -0.51
VPS9D1-204ENST00000565023 FOXB1Q99853 325 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms