RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 GSTM3P21266 225 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 PAX7P23759 505 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 GUCA1AP43080 201 aaPredicted RBP14.04□□□□□ -0.16
RAB40C-208ENST00000564703 RPS6KA3P51812 740 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 ERVK-25P63136 954 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 BEX5Q5H9J7 111 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 PGBD2Q6P3X8 592 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 DPY19L2P2Q6ZN68 376 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 C22orf34Q6ZV56 151 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 LRRC75AQ8NAA5 344 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 SYT14Q8NB59 555 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 OR4C15Q8NGM1 316 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 OR1K1Q8NGR3 316 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 FNDC8Q8TC99 324 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 ASB10Q8WXI3 467 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 TMEM54Q969K7 222 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 PIK3IP1Q96FE7 263 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 KATNB1Q9BVA0 655 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 RASSF1Q9NS23 344 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 MGAT4BQ9UQ53 548 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 AMDHD2Q9Y303 409 aa14.04□□□□□ -0.16
RAB40C-208ENST00000564703 MAGED1Q9Y5V3 778 aaPredicted RBP14.04□□□□□ -0.16
RAB40C-208ENST00000564703 ZNF99A8MXY4 864 aaPredicted RBP14.03□□□□□ -0.16
RAB40C-208ENST00000564703 ARHGEF9O43307 516 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 CTAG2O75638 210 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 THBDP07204 575 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 SLC6A6P31641 620 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 GSSP48637 474 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 ZNF84P51523 738 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 NR1H2P55055 460 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 GABPB1Q06547 395 aaPredicted RBP14.03□□□□□ -0.16
RAB40C-208ENST00000564703 FHL1Q13642 323 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 RFX4Q33E94 735 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 PHYHD1Q5SRE7 291 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 ARMC4Q5T2S8 1044 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 GPR139Q6DWJ6 353 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 RPL13AP3Q6NVV1 102 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 KLHL17Q6TDP4 642 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 LINGO2Q7L985 606 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 CCDC36Q8IYA8 594 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 ARIH2OSQ8N7S6 290 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 AQP11Q8NBQ7 271 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 OR10G2Q8NGC3 310 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 OR9Q2Q8NGE9 314 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 BCL2L2Q92843 193 aaPredicted RBP14.03□□□□□ -0.16
RAB40C-208ENST00000564703 SLCO4A1Q96BD0 722 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 BDH2Q9BUT1 245 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 ESRP2Q9H6T0 727 aaKnown RBP14.03□□□□□ -0.16
RAB40C-208ENST00000564703 ZNF556Q9HAH1 456 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 OBP2BQ9NPH6 170 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 SLC17A5Q9NRA2 495 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 ARMC1Q9NVT9 282 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 PDP1Q9P0J1 537 aaPredicted RBP14.03□□□□□ -0.16
RAB40C-208ENST00000564703 EDARQ9UNE0 448 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 IER3IP1Q9Y5U9 82 aa14.03□□□□□ -0.16
RAB40C-208ENST00000564703 A0A096LPE4 126 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 A0A1W2PPZ6 126 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 A0A1W2PR80 420 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 DHHO43323 396 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 KLF4O43474 513 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 TIPRLO75663 272 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 IGHMP01871 453 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 PGA4P0DJD7 388 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 PGA3P0DJD8 388 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 FCGR1AP12314 374 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 PRF1P14222 555 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 FASP25445 335 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 NOS3P29474 1203 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 CD47Q08722 323 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 CCNIQ14094 377 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 TBRG1Q3YBR2 411 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 THEM4Q5T1C6 240 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 LRFN4Q6PJG9 635 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 ZNF813Q6ZN06 617 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 OR52L1Q8NGH7 329 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 FANK1Q8TC84 345 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 MAGEE2Q8TD90 523 aaPredicted RBP14.02□□□□□ -0.17
RAB40C-208ENST00000564703 UTP4Q969X6 686 aaKnown RBP14.02□□□□□ -0.17
RAB40C-208ENST00000564703 GTPBP3Q969Y2 492 aaKnown RBP14.02□□□□□ -0.17
RAB40C-208ENST00000564703 DUS3LQ96G46 650 aaKnown RBP14.02□□□□□ -0.17
RAB40C-208ENST00000564703 BOD1Q96IK1 185 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 ZNF570Q96NI8 536 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 GPA33Q99795 319 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 FOXB1Q99853 325 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 ALG12Q9BV10 488 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 IFT27Q9BW83 186 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 MRPL13Q9BYD1 178 aaKnown RBP14.02□□□□□ -0.17
RAB40C-208ENST00000564703 CLEC4MQ9H2X3 399 aaPredicted RBP14.02□□□□□ -0.17
RAB40C-208ENST00000564703 OR52D1Q9H346 318 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 NRIP3Q9NQ35 241 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 IL20RAQ9UHF4 553 aa14.02□□□□□ -0.17
RAB40C-208ENST00000564703 ASH1LQ9NR48 2969 aaKnown RBP14.02□□□□□ -0.17
RAB40C-208ENST00000564703 AHCYL1O43865 530 aa14.01□□□□□ -0.17
RAB40C-208ENST00000564703 FARS2O95363 451 aaKnown RBP14.01□□□□□ -0.17
RAB40C-208ENST00000564703 CAPZA2P47755 286 aa14.01□□□□□ -0.17
RAB40C-208ENST00000564703 MYBPC1Q00872 1141 aa14.01□□□□□ -0.17
RAB40C-208ENST00000564703 RUNX1T1Q06455 604 aa14.01□□□□□ -0.17
RAB40C-208ENST00000564703 COX10Q12887 443 aa14.01□□□□□ -0.17
RAB40C-208ENST00000564703 HIKESHIQ53FT3 197 aa14.01□□□□□ -0.17
RAB40C-208ENST00000564703 WDR31Q8NA23 367 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms