RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 STAMBPO95630 424 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 IGF2P01344 180 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 IFNA14P01570 189 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 OPN1SWP03999 348 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 ZNF35P13682 527 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 DAOP14920 347 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 IFNGR1P15260 489 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 B4GALT1P15291 398 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 HNF1AP20823 631 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 LSP1P33241 339 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 GLRXP35754 106 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 BIDP55957 195 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 RAB1AP62820 205 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 GALK2Q01415 458 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 SELPLGQ14242 412 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 NPTX1Q15818 432 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 CARTPTQ16568 116 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 NRN1LQ496H8 165 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 IQCCQ4KMZ1 466 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 NANOGP8Q6NSW7 305 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 SVOPLQ8N434 492 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 OR8J3Q8NGG0 315 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 OR10A6Q8NH74 314 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 ZNF566Q969W8 418 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 MRPL24Q96A35 216 aaKnown RBP12.96□□□□□ -0.33
SPG7-210ENST00000564409 TAMM41Q96BW9 452 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 MS4A5Q9H3V2 200 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 NANOGQ9H9S0 305 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 TAS2R5Q9NYW4 299 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 BAG5Q9UL15 447 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 SLC7A7Q9UM01 511 aa12.96□□□□□ -0.33
SPG7-210ENST00000564409 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 LOC100289279A0A1B0GTE1 492 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 HTR3EA5X5Y0 456 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 RNF212BA8MTL3 300 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 BBIP1A8MTZ0 92 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 LRRN3E7EW58 273 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 C11orf98E9PRG8 122 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 RNF13O43567 381 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 SEC14L2O76054 403 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 LYPD3O95274 346 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 FARS2O95363 451 aaKnown RBP12.95□□□□□ -0.34
SPG7-210ENST00000564409 CH25HO95992 272 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 TACSTD2P09758 323 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 ASAH2BP0C7U1 165 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 OR8G3PP0DMU2 310 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 ZNF16P17020 682 aaPredicted RBP12.95□□□□□ -0.34
SPG7-210ENST00000564409 RBM34P42696 430 aaKnown RBP12.95□□□□□ -0.34
SPG7-210ENST00000564409 PTDSS1P48651 473 aaKnown RBP12.95□□□□□ -0.34
SPG7-210ENST00000564409 GZMMP51124 257 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 KRT80Q6KB66 452 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 ERICH5Q6P6B1 374 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 WDR88Q6ZMY6 472 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 UBASH3BQ8TF42 649 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 THOC1Q96FV9 657 aaKnown RBP12.95□□□□□ -0.34
SPG7-210ENST00000564409 ECSITQ9BQ95 431 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 C1orf198Q9H425 327 aa12.95□□□□□ -0.34
SPG7-210ENST00000564409 STX18Q9P2W9 335 aaKnown RBP12.95□□□□□ -0.34
SPG7-210ENST00000564409 FBN1P35555 2871 aaKnown RBP12.95□□□□□ -0.34
SPG7-210ENST00000564409 IGHV4-61A0A0C4DH41 118 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 SLC22A23A1A5C7 686 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 M0R233 179 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 SERPINI2O75830 405 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 BCL10O95999 233 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 PTHP01270 115 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 SERPINA5P05154 406 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 TROVE2P10155 538 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPG7-210ENST00000564409 THRBP10828 461 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 H2AFXP16104 143 aaPredicted RBP12.94□□□□□ -0.34
SPG7-210ENST00000564409 GIPRP48546 466 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 CHN2P52757 468 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 PIGFQ07326 219 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 MAPRE2Q15555 327 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 SLC22A24Q8N4F4 322 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 OR4D11Q8NGI4 311 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 VANGL1Q8TAA9 524 aaPredicted RBP12.94□□□□□ -0.34
SPG7-210ENST00000564409 LRRC58Q96CX6 371 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 MSI2Q96DH6 328 aaKnown RBP12.94□□□□□ -0.34
SPG7-210ENST00000564409 BPESC1Q9GZL8 116 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 ZNF224Q9NZL3 707 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 REV1Q9UBZ9 1251 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 SLC7A8Q9UHI5 535 aa12.94□□□□□ -0.34
SPG7-210ENST00000564409 A0A1W2PRG6 482 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 FBP2O00757 339 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 DHHO43323 396 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 OR5F1O95221 314 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 IGHG1P01857 330 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 MT-ND1P03886 318 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 THY1P04216 161 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 ADRA2AP08913 450 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 UMPSP11172 480 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 SRD5A1P18405 259 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 FXNQ16595 210 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 MMEL1Q495T6 779 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 GKAP1Q5VSY0 366 aaPredicted RBP12.93□□□□□ -0.34
SPG7-210ENST00000564409 TMEM53Q6P2H8 277 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 LRFN4Q6PJG9 635 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 NANOGNBQ7Z5D8 188 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 CALHM3Q86XJ0 350 aa12.93□□□□□ -0.34
SPG7-210ENST00000564409 RBM45Q8IUH3 476 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms