RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 OR5J2Q8NH18 312 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MFSD8Q8NHS3 518 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 PPP1R35Q8TAP8 253 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 ARL5BQ96KC2 179 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SNX18Q96RF0 628 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 NMNAT3Q96T66 252 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 NXF2Q9GZY0 626 aaKnown RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 RNF167Q9H6Y7 350 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 METTL7AQ9H8H3 244 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 ASCL3Q9NQ33 180 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 KLHL1Q9NR64 748 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SDHAF3Q9NRP4 125 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 INPP5EQ9NRR6 644 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 C14orf119Q9NWQ9 140 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 ASB6Q9NWX5 421 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 NDUFB11Q9NX14 153 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 KLRF1Q9NZS2 232 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 PPP4R1LQ9P1A2 415 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 TNFRSF10DQ9UBN6 386 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 IL17BQ9UHF5 180 aa5.87□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF346Q9UL40 294 aaKnown RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 POLR3KQ9Y2Y1 108 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MRPS18BQ9Y676 258 aaKnown RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 SIRT4Q9Y6E7 314 aaPredicted RBP5.87□□□□□ -1.47
CAPN3-210ENST00000561817 MED13Q9UHV7 2174 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 A0A087WZY1 265 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 A0A0G2JMM0 328 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 A0A1W2PPB8 328 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 A0A1W2PPH5 198 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 A0A1W2PRS3 328 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 NPIPB13A6NJU9 1138 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 C12orf71A8MTZ7 269 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 KIR3DP1A8MWS1 328 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 PRR32B1ATL7 298 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 NPIPB4C9JG80 1138 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 F8W735 103 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 M0R3G1 203 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 DCTN6O00399 190 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 MYL12BO14950 172 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 LRRTM2O43300 516 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 OR2T1O43869 369 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ZIC3O60481 467 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 DOK2O60496 412 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 NOL3O60936 208 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 GLCEO94923 617 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 AHSA1O95433 338 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 BCL10O95999 233 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 F13BP05160 661 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 HSMCR30P0CW71 290 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 GAAP10253 952 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 LIFP15018 202 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 MYL12AP19105 171 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 BTF3P20290 206 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 SHC1P29353 583 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 RPL4P36578 427 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 B3GALT5-AS1P59052 145 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 LSM3P62310 102 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ROR2Q01974 943 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 BDH1Q02338 343 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 C19orf57Q0VDD7 668 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 KRR1Q13601 381 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ATP1A4Q13733 1029 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 SLC35D3Q5M8T2 416 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ACER2Q5QJU3 275 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ZNF684Q5T5D7 378 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 PRAMEF20Q5VT98 475 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 EEF1A1P5Q5VTE0 462 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 TIGD3Q6B0B8 471 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 GPR139Q6DWJ6 353 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 POMZP3Q6PJE2 187 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 GDPGP1Q6ZNW5 385 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 SSX6Q7RTT6 188 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 TMPRSS7Q7RTY8 843 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 MDGA2Q7Z553 956 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 TMPRSS12Q86WS5 348 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 PLCZ1Q86YW0 608 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 GTPBP8Q8N3Z3 284 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 RFLNBQ8N5W9 214 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ACBD7Q8N6N7 88 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 C10orf53Q8N6V4 93 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ARIH2OSQ8N7S6 290 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 SCAIQ8N9R8 606 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 FAM98AQ8NCA5 519 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ADPRHL1Q8NDY3 354 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 RPS4Y2Q8TD47 263 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 SMAP2Q8WU79 429 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 SPRYD4Q8WW59 207 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ASB15Q8WXK1 588 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 SMPDL3BQ92485 455 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 NXPE2Q96DL1 559 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ZMYND19Q96E35 227 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 TMEM41AQ96HV5 264 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 UBL7Q96S82 380 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 SLIRPQ9GZT3 109 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 OR51V1Q9H2C8 321 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 GHITMQ9H3K2 345 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 TXNIPQ9H3M7 391 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 MARCH7Q9H992 704 aa5.86□□□□□ -1.47
CAPN3-210ENST00000561817 ISG20L2Q9H9L3 353 aaKnown RBP5.86□□□□□ -1.47
CAPN3-210ENST00000561817 EMC7Q9NPA0 242 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms